fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G12610.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm024920 not found in 234aa AT5G51990.1 not_not 0.447028423 III
Gm054799 not found in 207aa AT4G25480.1 not_not 0.441860465 III
Gm024921 not found in 191aa AT5G51990.1 not_not 0.431524547 III
Gm045269 not found in 231aa AT5G51990.1 not_not 0.431524547 III
Pt029157 not found in 231aa AT4G25490.1 not_not 0.488372093 III
Pt029739 not found in 213aa AT4G25480.1 not_not 0.480620155 III
Pt023286 not found in 255aa AT5G51990.1 not_not 0.459948320 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.505)


AT1G12610.1     -----------------------------------------------------------M
pt029739_POPTR_ --------MPN-------------------DRQE---ASSFSDS-------STSRR-VVH
pt029157_POPTR_ MVMGGSNSFSP-------------------DKQESSLSSLLSDS-------SGSQQDSPS
gm024921_Glyma0 ---------------------------------------------------------MCW
gm045269_Glyma1 --MYTLNHSSYLY----------------------HVSPELSSSLDSSSPASEGSRGVAF
gm024920_Glyma0 --MFTLNHSSDLY----------------------HVSPELSSSLDTSSPASEGSRGVAF
pt023286_POPTR_ --MDLFSHYSDPSPFGATDFWSVFNENNGINQEQCSYSPVLSDSSISSNVTTRVQPAPNF
gm054799_Glyma2 --MFSINHFSD---------------------------P------DATSPGSGGSSRPAL
                                                                            

AT1G12610.1     NNDDIILAEMRPKKRAGRRV-----FKETRHPVYRGIRRRNGDKWVCEVREPTHQRRIWL
pt029739_POPTR_ SDEEVLLATSFPKKRAGRRI-----FRETRHPVFRGVRKRNGNKWVCEMREPNKKSRIWL
pt029157_POPTR_ SNEKVLLATSRPKKRAGRRI-----FKETRHPIFRGVRKRNGDKWVCELREPNKKSRIWL
gm024921_Glyma0 GHEHHI-----PKQL--RHIQHLLFFLHIKHPL---CRRR------CCLR---HRHRHRL
gm045269_Glyma1 SDEEVRLAVRHPKKRAGRKK-----FRETRHPVYRGVRRRNTDKWVSEVREPNKKTRIWL
gm024920_Glyma0 SDEEVRLAVRHPKKRAGRKK-----FRETRHPVYRGVRRRNSDKWVCEVREPNKKTRIWL
pt023286_POPTR_ SDEEVMLASRNPKKRAGRKK-----FRETRHPVYRGVRRRNSGKWVCEVREPNKKSRIWL
gm054799_Glyma2 SDEDFFLAASNPKKRAGRKK-----FRETRHPVYRGVRRRDSGKWVCEVREPNKKSRIWL
                ..:.       **:   *:      * . :**:    *:*      . :*   :: *  *

AT1G12610.1     GTYPTADMAARAHDVAVLALRGRSACLNFADSAWRLPVPESNDPDVIRRVAAEAAEMFRP
pt029739_POPTR_ GTYPTPEMAARAHDVAALALRGKSACLNFADSAWRLPVPVSKDSKDITRAANEAAELFRP
pt029157_POPTR_ GTYPTPEMAARAHDVAALAFRGKSACLNFADSAWRLPVPISNEAKDIRRAASEAAELFRT
gm024921_Glyma0 HTL-LPSWAASA---AAF-------CISFASAV--------AGTGNRQAESAKFRQAYRP
gm045269_Glyma1 GTFPTPEMAARAHDVAAMALRGRYACLNFADSTWRLPIPATANAKDIQKAAAEAAEAFRP
gm024920_Glyma0 GTFPTPEMAARAHDVAAMALRGRYACLNFADSAWRLPVPATAEAKDIQKAAAEAAQAFRP
pt023286_POPTR_ GTFPTAEMAARAHDVAALALRGRSACLNFADSAWRLPVPASSEAKDIQKAAAEAAGGFRP
gm054799_Glyma2 GTFPTAEMAARAHDVAAIALRGRSACLNFADSASRLPVPATAEARDIQKAAAEAAEAFRP
                 *   .. ** *   *.:       *:.**.:.          .      : :    :*.

AT1G12610.1     VDLESGITV-----------LPCAGDDVDLGFGSGSGSGSGSEERNSSSYGFG-DYEE--
pt029739_POPTR_ QEF-GGHPA---KQQD------SNAEAV---------FAMPGEN-----DVFF---EEAV
pt029157_POPTR_ SDL-GGQVMEDFRREDRGEVRSSTNDDI---------RDLPSEN-----VGYI--DEEAE
gm024921_Glyma0 LRAIAATSC-----------ARAAISGV---------GKVPSQI-----LVFL-------
gm045269_Glyma1 SQTL--ENT---NTKQ--ECVKVVT------------TTTITEQK---RGMFYTEEEEQV
gm024920_Glyma0 DQTL--KNA---NTRQ--ECVEAVAVAVA-------ETTTATAQ-----GVFYMEEEEQV
pt023286_POPTR_ EGCVGGELM---RTGD--EGEKAAET-----------TAEAGEE------VFY-MDDEAV
gm054799_Glyma2 GKD-----------------DDAVAERV---------AATATER----------EEEQEE
                                                                            

AT1G12610.1     --VSTTMMRLAEGPLMSP------------------------------------PRSYME
pt029739_POPTR_ FDMPGLLVDMAEGLLLSP------------------------------------PRYVRN
pt029157_POPTR_ FNMPGLLASMAEGLLLSP------------------------------------PHYT-G
gm024921_Glyma0 LGSLTSHTHLSEFLLLTPRYTGWRVSRNFFRPARFFGCLTASRTSSSENATPREPSEAGE
gm045269_Glyma1 LDMPELLRNM---VLMSP------------------------------------THCIGY
gm024920_Glyma0 LDMPELLRNM---VLMSP------------------------------------THCLGY
pt023286_POPTR_ FGMPGLLANMAEGMLLPP------------------------------------PHCGGG
gm054799_Glyma2 GMVPEYLRNM---VLMSP------------------------------------THCFGS
                         :    *:.*                                    .     

AT1G12610.1     -DMTPTNVYTEEEMCYEDMSLWSYRY-
pt029739_POPTR_ -DCNDLDHMENG----SDLSLWSY---
pt029157_POPTR_ -DWND---GEID----ADWSLWSS---
gm024921_Glyma0 ------DVSKEDE---SSGETWYKSEE
gm045269_Glyma1 -EYEDADLDAQD----AEVSLWSFSI-
gm024920_Glyma0 -EYEDADLDAQD----AEVSLWNFSI-
pt023286_POPTR_ -GDGWDNMENID----ADMPLWSFSI-
gm054799_Glyma2 DEYGSADVEFDD----AEVSLWSYSI-
                                 .   *
BoxShade v3.31 C (beta, 970507) Output
AT1G12610.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M
pt029739_POPTR_    - - - - - - - - M P N - - - - - - - - - - - - - - - - - - - D R Q E - - - A S S F S D S - - - - - - - S T S R R - V V H
pt029157_POPTR_    M V M G G S N S F S P - - - - - - - - - - - - - - - - - - - D K Q E S S L S S L L S D S - - - - - - - S G S Q Q D S P S
gm024921_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M C W
gm045269_Glyma1    - - M Y T L N H S S Y L Y - - - - - - - - - - - - - - - - - - - - - - H V S P E L S S S L D S S S P A S E G S R G V A F
gm024920_Glyma0    - - M F T L N H S S D L Y - - - - - - - - - - - - - - - - - - - - - - H V S P E L S S S L D T S S P A S E G S R G V A F
pt023286_POPTR_    - - M D L F S H Y S D P S P F G A T D F W S V F N E N N G I N Q E Q C S Y S P V L S D S S I S S N V T T R V Q P A P N F
gm054799_Glyma2    - - M F S I N H F S D - - - - - - - - - - - - - - - - - - - - - - - - - - - P - - - - - - D A T S P G S G G S S R P A L
 
AT1G12610.1     N N D D I I L A E M R P K K R A G R R V - - - - - F K E T R H P V Y R G I R R R N G D K W V C E V R E P T H Q R R I W L
pt029739_POPTR_    S D E E V L L A T S F P K K R A G R R I - - - - - F R E T R H P V F R G V R K R N G N K W V C E M R E P N K K S R I W L
pt029157_POPTR_    S N E K V L L A T S R P K K R A G R R I - - - - - F K E T R H P I F R G V R K R N G D K W V C E L R E P N K K S R I W L
gm024921_Glyma0    G H E H H I - - - - - P K Q L - - R H I Q H L L F F L H I K H P L - - - C R R R - - - - - - C C L R - - - H R H R H R L
gm045269_Glyma1    S D E E V R L A V R H P K K R A G R K K - - - - - F R E T R H P V Y R G V R R R N T D K W V S E V R E P N K K T R I W L
gm024920_Glyma0    S D E E V R L A V R H P K K R A G R K K - - - - - F R E T R H P V Y R G V R R R N S D K W V C E V R E P N K K T R I W L
pt023286_POPTR_    S D E E V M L A S R N P K K R A G R K K - - - - - F R E T R H P V Y R G V R R R N S G K W V C E V R E P N K K S R I W L
gm054799_Glyma2    S D E D F F L A A S N P K K R A G R K K - - - - - F R E T R H P V Y R G V R R R D S G K W V C E V R E P N K K S R I W L
 
AT1G12610.1     G T Y P T A D M A A R A H D V A V L A L R G R S A C L N F A D S A W R L P V P E S N D P D V I R R V A A E A A E M F R P
pt029739_POPTR_    G T Y P T P E M A A R A H D V A A L A L R G K S A C L N F A D S A W R L P V P V S K D S K D I T R A A N E A A E L F R P
pt029157_POPTR_    G T Y P T P E M A A R A H D V A A L A F R G K S A C L N F A D S A W R L P V P I S N E A K D I R R A A S E A A E L F R T
gm024921_Glyma0    H T L - L P S W A A S A - - - A A F - - - - - - - C I S F A S A V - - - - - - - - A G T G N R Q A E S A K F R Q A Y R P
gm045269_Glyma1    G T F P T P E M A A R A H D V A A M A L R G R Y A C L N F A D S T W R L P I P A T A N A K D I Q K A A A E A A E A F R P
gm024920_Glyma0    G T F P T P E M A A R A H D V A A M A L R G R Y A C L N F A D S A W R L P V P A T A E A K D I Q K A A A E A A Q A F R P
pt023286_POPTR_    G T F P T A E M A A R A H D V A A L A L R G R S A C L N F A D S A W R L P V P A S S E A K D I Q K A A A E A A G G F R P
gm054799_Glyma2    G T F P T A E M A A R A H D V A A I A L R G R S A C L N F A D S A S R L P V P A T A E A R D I Q K A A A E A A E A F R P
 
AT1G12610.1     V D L E S G I T V - - - - - - - - - - - L P C A G D D V D L G F G S G S G S G S G S E E R N S S S Y G F G - D Y E E - -
pt029739_POPTR_    Q E F - G G H P A - - - K Q Q D - - - - - - S N A E A V - - - - - - - - - F A M P G E N - - - - - D V F F - - - E E A V
pt029157_POPTR_    S D L - G G Q V M E D F R R E D R G E V R S S T N D D I - - - - - - - - - R D L P S E N - - - - - V G Y I - - D E E A E
gm024921_Glyma0    L R A I A A T S C - - - - - - - - - - - A R A A I S G V - - - - - - - - - G K V P S Q I - - - - - L V F L - - - - - - -
gm045269_Glyma1    S Q T L - - E N T - - - N T K Q - - E C V K V V T - - - - - - - - - - - - T T T I T E Q K - - - R G M F Y T E E E E Q V
gm024920_Glyma0    D Q T L - - K N A - - - N T R Q - - E C V E A V A V A V A - - - - - - - E T T T A T A Q - - - - - G V F Y M E E E E Q V
pt023286_POPTR_    E G C V G G E L M - - - R T G D - - E G E K A A E T - - - - - - - - - - - T A E A G E E - - - - - - V F Y - M D D E A V
gm054799_Glyma2    G K D - - - - - - - - - - - - - - - - - D D A V A E R V - - - - - - - - - A A T A T E R - - - - - - - - - - E E E Q E E
 
AT1G12610.1     - - V S T T M M R L A E G P L M S P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P R S Y M E
pt029739_POPTR_    F D M P G L L V D M A E G L L L S P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P R Y V R N
pt029157_POPTR_    F N M P G L L A S M A E G L L L S P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P H Y T - G
gm024921_Glyma0    L G S L T S H T H L S E F L L L T P R Y T G W R V S R N F F R P A R F F G C L T A S R T S S S E N A T P R E P S E A G E
gm045269_Glyma1    L D M P E L L R N M - - - V L M S P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T H C I G Y
gm024920_Glyma0    L D M P E L L R N M - - - V L M S P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T H C L G Y
pt023286_POPTR_    F G M P G L L A N M A E G M L L P P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P H C G G G
gm054799_Glyma2    G M V P E Y L R N M - - - V L M S P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T H C F G S
 
AT1G12610.1     - D M T P T N V Y T E E E M C Y E D M S L W S Y R Y -
pt029739_POPTR_    - D C N D L D H M E N G - - - - S D L S L W S Y - - -
pt029157_POPTR_    - D W N D - - - G E I D - - - - A D W S L W S S - - -
gm024921_Glyma0    - - - - - - D V S K E D E - - - S S G E T W Y K S E E
gm045269_Glyma1    - E Y E D A D L D A Q D - - - - A E V S L W S F S I -
gm024920_Glyma0    - E Y E D A D L D A Q D - - - - A E V S L W N F S I -
pt023286_POPTR_    - G D G W D N M E N I D - - - - A D M P L W S F S I -
gm054799_Glyma2    D E Y G S A D V E F D D - - - - A E V S L W S Y S I -
 
0