fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G12610.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt029157 not found in 231aa AT4G25490.1 not_not 0.488372093 III
Pt029739 not found in 213aa AT4G25480.1 not_not 0.480620155 III
Pt023286 not found in 255aa AT5G51990.1 not_not 0.459948320 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.505)


AT1G12610.1     ---------------------------M--------------------------------
pt029157_POPTR_ -------------------MVMGGSNSFSPDKQESSLSSLLSDSSGSQQDSPS-------
pt029739_POPTR_ ---------------------------MPNDRQE---ASSFSDSSTSRR-VVH-------
pt023286_POPTR_ MDLFSHYSDPSPFGATDFWSVFNENNGI--NQEQCSYSPVLSDSSISSNVTTRVQPAPNF
                                           :                                

AT1G12610.1     NNDDIILAEMRPKKRAGRRVFKETRHPVYRGIRRRNGDKWVCEVREPTHQRRIWLGTYPT
pt029157_POPTR_ SNEKVLLATSRPKKRAGRRIFKETRHPIFRGVRKRNGDKWVCELREPNKKSRIWLGTYPT
pt029739_POPTR_ SDEEVLLATSFPKKRAGRRIFRETRHPVFRGVRKRNGNKWVCEMREPNKKSRIWLGTYPT
pt023286_POPTR_ SDEEVMLASRNPKKRAGRKKFRETRHPVYRGVRRRNSGKWVCEVREPNKKSRIWLGTFPT
                .::.::**   *******: *:*****::**:*:**..*****:***.:: ******:**

AT1G12610.1     ADMAARAHDVAVLALRGRSACLNFADSAWRLPVPESNDPDVIRRVAAEAAEMFRPVDLES
pt029157_POPTR_ PEMAARAHDVAALAFRGKSACLNFADSAWRLPVPISNEAKDIRRAASEAAELFRTSD-LG
pt029739_POPTR_ PEMAARAHDVAALALRGKSACLNFADSAWRLPVPVSKDSKDITRAANEAAELFRPQE-FG
pt023286_POPTR_ AEMAARAHDVAALALRGRSACLNFADSAWRLPVPASSEAKDIQKAAAEAAGGFRPEGCVG
                .:*********.**:**:**************** *.:.. * :.* ***  **.    .

AT1G12610.1     GITVLPCAGDDVDLGFGSGSGSGSGSEERNSSSYGFGDYEEV---STTMMRLAEGPLMSP
pt029157_POPTR_ GQVMED--FRREDRGE-VRSSTNDDIRDLPSENVGYIDEEAEFNMPGLLASMAEGLLLSP
pt029739_POPTR_ GHPA-----KQQD-------SNAEAVFAMPGENDVFF-EEAVFDMPGLLVDMAEGLLLSP
pt023286_POPTR_ GELM-----RTGDEGEKAAETTAEA-----GEEVFYMDDEAVFGMPGLLANMAEGMLLPP
                *           *        . .      ...  :   *     .  :  :*** *:.*

AT1G12610.1     PRSYMEDMTPTNVYTEEEMCYEDMSLWSYRY
pt029157_POPTR_ PHYT-GD---WND---GEI-DADWSLWSS--
pt029739_POPTR_ PRYVRND---CNDLDHMEN-GSDLSLWSY--
pt023286_POPTR_ PHCG-GG---GDGWDNMENIDADMPLWSFSI
                *:    .    :     *    * .***
BoxShade v3.31 C (beta, 970507) Output
AT1G12610.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - M - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt029157_POPTR_    - - - - - - - - - - - - - - - - - - - M V M G G S N S F S P D K Q E S S L S S L L S D S S G S Q Q D S P S - - - - - - -
pt029739_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - M P N D R Q E - - - A S S F S D S S T S R R - V V H - - - - - - -
pt023286_POPTR_    M D L F S H Y S D P S P F G A T D F W S V F N E N N G I - - N Q E Q C S Y S P V L S D S S I S S N V T T R V Q P A P N F
 
AT1G12610.1     N N D D I I L A E M R P K K R A G R R V F K E T R H P V Y R G I R R R N G D K W V C E V R E P T H Q R R I W L G T Y P T
pt029157_POPTR_    S N E K V L L A T S R P K K R A G R R I F K E T R H P I F R G V R K R N G D K W V C E L R E P N K K S R I W L G T Y P T
pt029739_POPTR_    S D E E V L L A T S F P K K R A G R R I F R E T R H P V F R G V R K R N G N K W V C E M R E P N K K S R I W L G T Y P T
pt023286_POPTR_    S D E E V M L A S R N P K K R A G R K K F R E T R H P V Y R G V R R R N S G K W V C E V R E P N K K S R I W L G T F P T
 
AT1G12610.1     A D M A A R A H D V A V L A L R G R S A C L N F A D S A W R L P V P E S N D P D V I R R V A A E A A E M F R P V D L E S
pt029157_POPTR_    P E M A A R A H D V A A L A F R G K S A C L N F A D S A W R L P V P I S N E A K D I R R A A S E A A E L F R T S D - L G
pt029739_POPTR_    P E M A A R A H D V A A L A L R G K S A C L N F A D S A W R L P V P V S K D S K D I T R A A N E A A E L F R P Q E - F G
pt023286_POPTR_    A E M A A R A H D V A A L A L R G R S A C L N F A D S A W R L P V P A S S E A K D I Q K A A A E A A G G F R P E G C V G
 
AT1G12610.1     G I T V L P C A G D D V D L G F G S G S G S G S G S E E R N S S S Y G F G D Y E E V - - - S T T M M R L A E G P L M S P
pt029157_POPTR_    G Q V M E D - - F R R E D R G E - V R S S T N D D I R D L P S E N V G Y I D E E A E F N M P G L L A S M A E G L L L S P
pt029739_POPTR_    G H P A - - - - - K Q Q D - - - - - - - S N A E A V F A M P G E N D V F F - E E A V F D M P G L L V D M A E G L L L S P
pt023286_POPTR_    G E L M - - - - - R T G D E G E K A A E T T A E A - - - - - G E E V F Y M D D E A V F G M P G L L A N M A E G M L L P P
 
AT1G12610.1     P R S Y M E D M T P T N V Y T E E E M C Y E D M S L W S Y R Y
pt029157_POPTR_    P H Y T - G D - - - W N D - - - G E I - D A D W S L W S S - -
pt029739_POPTR_    P R Y V R N D - - - C N D L D H M E N - G S D L S L W S Y - -
pt023286_POPTR_    P H C G - G G - - - G D G W D N M E N I D A D M P L W S F S I
 
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