fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G12610.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt026202 not found in 248aa AT5G51990.1 1st_not 0.490956072 II
Pt029157 not found in 231aa AT4G25490.1 not_not 0.488372093 III
Pt029739 not found in 213aa AT4G25480.1 not_not 0.480620155 III
Pt023286 not found in 255aa AT5G51990.1 not_not 0.459948320 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.505)


AT1G12610.1     ---------------------------------------------------------MNN
pt026202_POPTR_ MDVFCSYSDQNPIGSMSLLSVLDE------QECSYSSVLSDSSITSSVTKGVQPGAIFSD
pt023286_POPTR_ MDLFSHYSDPSPFGATDFWSVFNENNGINQEQCSYSPVLSDSSISSNVTTRVQPAPNFSD
pt029157_POPTR_ ----------MVMGGSN--SFSPD-----KQESSLSSLLSDSSGSQQ-------DSPSSN
pt029739_POPTR_ --------------------MPND-----RQE---ASSFSDSSTSRR--------VVHSD
                                                                          .:

AT1G12610.1     DDIILAEMRPKKRAGRRVFKETRHPVYRGIRRRNGDKWVCEVREPTHQRRIWLGTYPTAD
pt026202_POPTR_ EEVILASRNPKKRAGRKKFRETRHPVYRGVRRRNSGKWVCEVREPNKKSRIWLGTFPTAD
pt023286_POPTR_ EEVMLASRNPKKRAGRKKFRETRHPVYRGVRRRNSGKWVCEVREPNKKSRIWLGTFPTAE
pt029157_POPTR_ EKVLLATSRPKKRAGRRIFKETRHPIFRGVRKRNGDKWVCELREPNKKSRIWLGTYPTPE
pt029739_POPTR_ EEVLLATSFPKKRAGRRIFRETRHPVFRGVRKRNGNKWVCEMREPNKKSRIWLGTYPTPE
                :.::**   *******: *:*****::**:*:**..*****:***.:: ******:**.:

AT1G12610.1     MAARAHDVAVLALRGRSACLNFADSAWRLPVPESNDPDVIRRVAAEAAEMFRPVD-LESG
pt026202_POPTR_ MAARAHDVAALALRGRSACLNFADSAWRLPTPASSDAKDIQKAAAEAAEAFRPEGSLGVE
pt023286_POPTR_ MAARAHDVAALALRGRSACLNFADSAWRLPVPASSEAKDIQKAAAEAAGGFRPEGCVGGE
pt029157_POPTR_ MAARAHDVAALAFRGKSACLNFADSAWRLPVPISNEAKDIRRAASEAAELFRTSD-LGGQ
pt029739_POPTR_ MAARAHDVAALALRGKSACLNFADSAWRLPVPVSKDSKDITRAANEAAELFRPQE-FGGH
                *********.**:**:**************.* *.:.. * :.* ***  **.   .   

AT1G12610.1     ITVLPCAGDDVDLGFGSGSGSGSGSEERNSSSYGFGDYE---EVSTTMMRLAEGPLMSPP
pt026202_POPTR_ LT---RTGDEVE----KVAGT-------AAGDVFYMDDDADFGMPGLLANIAEGMLLPPP
pt023286_POPTR_ LM---RTGDEGE----KAAETT----AEAGEEVFYMDDEAVFGMPGLLANMAEGMLLPPP
pt029157_POPTR_ VMEDFRREDRGE----VRSSTNDDIRDLPSENVGYIDEEAEFNMPGLLASMAEGLLLSPP
pt029739_POPTR_ PA---KQQD----------SNAEAVFAMPGENDVFF-EEAVFDMPGLLVDMAEGLLLSPP
                        *           .        . .  :   :    :.  :  :*** *:.**

AT1G12610.1     R--SYM-EDMTPTNVYTEEEMCYEDMSLWSYRY
pt026202_POPTR_ NCCGYSGGDSLD-NMENND----TDMSLWSFSV
pt023286_POPTR_ HCGG--GGDGWD-NMENID----ADMPLWSFSI
pt029157_POPTR_ H---YT-GDWND---GEID----ADWSLWSS--
pt029739_POPTR_ R---YVRNDCNDLDHMENG----SDLSLWSY--
                .       *               * .***
BoxShade v3.31 C (beta, 970507) Output
AT1G12610.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M N N
pt026202_POPTR_    M D V F C S Y S D Q N P I G S M S L L S V L D E - - - - - - Q E C S Y S S V L S D S S I T S S V T K G V Q P G A I F S D
pt023286_POPTR_    M D L F S H Y S D P S P F G A T D F W S V F N E N N G I N Q E Q C S Y S P V L S D S S I S S N V T T R V Q P A P N F S D
pt029157_POPTR_    - - - - - - - - - - M V M G G S N - - S F S P D - - - - - K Q E S S L S S L L S D S S G S Q Q - - - - - - - D S P S S N
pt029739_POPTR_    - - - - - - - - - - - - - - - - - - - - M P N D - - - - - R Q E - - - A S S F S D S S T S R R - - - - - - - - V V H S D
 
AT1G12610.1     D D I I L A E M R P K K R A G R R V F K E T R H P V Y R G I R R R N G D K W V C E V R E P T H Q R R I W L G T Y P T A D
pt026202_POPTR_    E E V I L A S R N P K K R A G R K K F R E T R H P V Y R G V R R R N S G K W V C E V R E P N K K S R I W L G T F P T A D
pt023286_POPTR_    E E V M L A S R N P K K R A G R K K F R E T R H P V Y R G V R R R N S G K W V C E V R E P N K K S R I W L G T F P T A E
pt029157_POPTR_    E K V L L A T S R P K K R A G R R I F K E T R H P I F R G V R K R N G D K W V C E L R E P N K K S R I W L G T Y P T P E
pt029739_POPTR_    E E V L L A T S F P K K R A G R R I F R E T R H P V F R G V R K R N G N K W V C E M R E P N K K S R I W L G T Y P T P E
 
AT1G12610.1     M A A R A H D V A V L A L R G R S A C L N F A D S A W R L P V P E S N D P D V I R R V A A E A A E M F R P V D - L E S G
pt026202_POPTR_    M A A R A H D V A A L A L R G R S A C L N F A D S A W R L P T P A S S D A K D I Q K A A A E A A E A F R P E G S L G V E
pt023286_POPTR_    M A A R A H D V A A L A L R G R S A C L N F A D S A W R L P V P A S S E A K D I Q K A A A E A A G G F R P E G C V G G E
pt029157_POPTR_    M A A R A H D V A A L A F R G K S A C L N F A D S A W R L P V P I S N E A K D I R R A A S E A A E L F R T S D - L G G Q
pt029739_POPTR_    M A A R A H D V A A L A L R G K S A C L N F A D S A W R L P V P V S K D S K D I T R A A N E A A E L F R P Q E - F G G H
 
AT1G12610.1     I T V L P C A G D D V D L G F G S G S G S G S G S E E R N S S S Y G F G D Y E - - - E V S T T M M R L A E G P L M S P P
pt026202_POPTR_    L T - - - R T G D E V E - - - - K V A G T - - - - - - - A A G D V F Y M D D D A D F G M P G L L A N I A E G M L L P P P
pt023286_POPTR_    L M - - - R T G D E G E - - - - K A A E T T - - - - A E A G E E V F Y M D D E A V F G M P G L L A N M A E G M L L P P P
pt029157_POPTR_    V M E D F R R E D R G E - - - - V R S S T N D D I R D L P S E N V G Y I D E E A E F N M P G L L A S M A E G L L L S P P
pt029739_POPTR_    P A - - - K Q Q D - - - - - - - - - - S N A E A V F A M P G E N D V F F - E E A V F D M P G L L V D M A E G L L L S P P
 
AT1G12610.1     R - - S Y M - E D M T P T N V Y T E E E M C Y E D M S L W S Y R Y
pt026202_POPTR_    N C C G Y S G G D S L D - N M E N N D - - - - T D M S L W S F S V
pt023286_POPTR_    H C G G - - G G D G W D - N M E N I D - - - - A D M P L W S F S I
pt029157_POPTR_    H - - - Y T - G D W N D - - - G E I D - - - - A D W S L W S S - -
pt029739_POPTR_    R - - - Y V R N D C N D L D H M E N G - - - - S D L S L W S Y - -
 
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