fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G14685.3 ATFKGNLGLQLMSTID at 21/279 in AT1G14685.3
ATFKGNLGLQLMSTID at 21/279 in AT1G14685.2
ATFKGNLGLQLMSTID at 21/279 in AT1G14685.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb003060 DTVKGNLGLQLMSSVP in 22/348 AT1G14685.1 1st_not 0.428318584 II
Sb022929 DTVKGNLGLQLMSSAP in 22/455 AT1G14685.1 not_not 0.417699115 III
Sb022928 not found in 426aa AT1G14685.1 not_not 0.417699115 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G14685.3     ----------MDDD----GFRNWGYYEPAAATFKGNLGLQLMSTI--DRNTKPFLPGRDP
Sb003060_Sorbi1 ----------MDDEDGSLGIRNWGFYD----TVKGNLGLQLMSSVPPDRDTKSLL-----
Sb022929_Sorbi1 ----------MDDDDGSLGIRNWGFYD----TVKGNLGLQLMSSAPPDRDTKSLL-----
Sb022928_Sorbi1 RWICCSDKSEMDDDDGSLGIRNWGFYD----TVKGNLGLQLMSSAPPDRDTKSLL-----
                          ***:    *:****:*:    *.**********:   **:**.:*     

AT1G14685.3     NLMMGPNGSY-----HHQEP----------------------------PIHMSYN----W
Sb003060_Sorbi1 -----PNGAFLQHHGHHNAPHQLHMQHSQHPRGPAGGGASGGMPTESQPIHMDFSRNEAW
Sb022929_Sorbi1 -----PNGAFLQHHGHHNAPHQLHMQHSLHSRGPAGGRASGGMPTESQPIHMDFSRNEAW
Sb022928_Sorbi1 -----PNGAFLQHHGHHNAPHQLHMQHSLHSRGPAGGRASGGMPTESQPIHMDFSRNEAW
                     ***::     **: *                            ****.:.    *

AT1G14685.3     INQQ-------KDKFFNMLPVT----TATPNY-------GNVLPETSSAPSMQMNLHHHL
Sb003060_Sorbi1 LHQS-HHQRPSEQKVLHSRPIRPAGHAGHPGHGGHPAHVGHIVHHHPTGYGMVSDAQHTL
Sb022929_Sorbi1 LHQPHHHQRPREQRVLHSRPIGPDGHVGHPGYGGHPAHGGHIVHHHPTGYEMISDAQHTL
Sb022928_Sorbi1 LHQPHHHQRPREQRVLHSRPIGPDGHVGHPGYGGHPAHGGHIVHHHPTGYEMISDAQHTL
                ::*        :::.::  *:     .. *.:       *::: . .:.  *  : :* *

AT1G14685.3     QT-----------------EENPVKL-EEEIVVQT----KKRKTNAKAGSTPKAKKPRKP
Sb003060_Sorbi1 QMMQPQLETQLQEPPPCKEEEAPPPLIEDHAVVSTGPPVKKKQRGRQQNRQPKSPKPKKP
Sb022929_Sorbi1 QMMQPQLETQLQEPPPCKEEEAPPPLIEDHTAVSTGPPVKKRQRGRQQNRQPKSPKPKKP
Sb022928_Sorbi1 QMMQPQLETQLQEPPPCKEEEAPPPLIEDHTAVSTGPPVKKRQRGRQQNRQPKSPKPKKP
                *                  ** *  * *:. .*.*    **:: . : .  **: **:**

AT1G14685.3     KD-----ENSNNNNNNNTNVTRVKPAKKSVDLVINGVSMDISGLPVPICTCTGAPQQCYR
Sb003060_Sorbi1 KKIAVPLEDGALNG----HAPRRRGPKKTVGMVINGIELDLATIPTPVCSCTGAPQQCYR
Sb022929_Sorbi1 KKAAVPVEDGAPNG----HAPRRRGPKKTVGMVINGIELDLANIPTPVCSCTGSPQQCYR
Sb022928_Sorbi1 KKAAVPVEDGAPNG----HAPRRRGPKKTVGMVINGIELDLANIPTPVCSCTGSPQQCYR
                *.     *:.  *.    :..* : .**:*.:****:.:*:: :*.*:*:***:******

AT1G14685.3     WGCGGWQSACCTTNISMHPLPMSTKRRGARISGRKMSQGAFKKVLEKLASDGFNFGNPID
Sb003060_Sorbi1 WGPGGWQSACCTTSISTYPLPMSTKRRGARISGRKMSQGAFKKVLEKLAGEGYNLANPID
Sb022929_Sorbi1 WGAGGWQSACCTTSISMYPLPMSTKRRGARISGRKMSHGAFKKVLEKLAGEGYNLANPIN
Sb022928_Sorbi1 WGAGGWQSACCTTSISMYPLPMSTKRRGARISGRKMSHGAFKKVLEKLAGEGYNLANPIN
                ** **********.** :*******************:***********.:*:*:.***:

AT1G14685.3     LKSHWARHGTNKFVTIR
Sb003060_Sorbi1 LKTFWAKHGTNKFVTIR
Sb022929_Sorbi1 LKTFWAKHGTNKFVTIR
Sb022928_Sorbi1 LKTFWAKHGTNKFVTIR
                **:.**:**********
BoxShade v3.31 C (beta, 970507) Output
AT1G14685.3     - - - - - - - - - - M D D D - - - - G F R N W G Y Y E P A A A T F K G N L G L Q L M S T I - - D R N T K P F L P G R D P
Sb003060_Sorbi1    - - - - - - - - - - M D D E D G S L G I R N W G F Y D - - - - T V K G N L G L Q L M S S V P P D R D T K S L L - - - - -
Sb022929_Sorbi1    - - - - - - - - - - M D D D D G S L G I R N W G F Y D - - - - T V K G N L G L Q L M S S A P P D R D T K S L L - - - - -
Sb022928_Sorbi1    R W I C C S D K S E M D D D D G S L G I R N W G F Y D - - - - T V K G N L G L Q L M S S A P P D R D T K S L L - - - - -
 
AT1G14685.3     N L M M G P N G S Y - - - - - H H Q E P - - - - - - - - - - - - - - - - - - - - - - - - - - - - P I H M S Y N - - - - W
Sb003060_Sorbi1    - - - - - P N G A F L Q H H G H H N A P H Q L H M Q H S Q H P R G P A G G G A S G G M P T E S Q P I H M D F S R N E A W
Sb022929_Sorbi1    - - - - - P N G A F L Q H H G H H N A P H Q L H M Q H S L H S R G P A G G R A S G G M P T E S Q P I H M D F S R N E A W
Sb022928_Sorbi1    - - - - - P N G A F L Q H H G H H N A P H Q L H M Q H S L H S R G P A G G R A S G G M P T E S Q P I H M D F S R N E A W
 
AT1G14685.3     I N Q Q - - - - - - - K D K F F N M L P V T - - - - T A T P N Y - - - - - - - G N V L P E T S S A P S M Q M N L H H H L
Sb003060_Sorbi1    L H Q S - H H Q R P S E Q K V L H S R P I R P A G H A G H P G H G G H P A H V G H I V H H H P T G Y G M V S D A Q H T L
Sb022929_Sorbi1    L H Q P H H H Q R P R E Q R V L H S R P I G P D G H V G H P G Y G G H P A H G G H I V H H H P T G Y E M I S D A Q H T L
Sb022928_Sorbi1    L H Q P H H H Q R P R E Q R V L H S R P I G P D G H V G H P G Y G G H P A H G G H I V H H H P T G Y E M I S D A Q H T L
 
AT1G14685.3     Q T - - - - - - - - - - - - - - - - - E E N P V K L - E E E I V V Q T - - - - K K R K T N A K A G S T P K A K K P R K P
Sb003060_Sorbi1    Q M M Q P Q L E T Q L Q E P P P C K E E E A P P P L I E D H A V V S T G P P V K K K Q R G R Q Q N R Q P K S P K P K K P
Sb022929_Sorbi1    Q M M Q P Q L E T Q L Q E P P P C K E E E A P P P L I E D H T A V S T G P P V K K R Q R G R Q Q N R Q P K S P K P K K P
Sb022928_Sorbi1    Q M M Q P Q L E T Q L Q E P P P C K E E E A P P P L I E D H T A V S T G P P V K K R Q R G R Q Q N R Q P K S P K P K K P
 
AT1G14685.3     K D - - - - - E N S N N N N N N N T N V T R V K P A K K S V D L V I N G V S M D I S G L P V P I C T C T G A P Q Q C Y R
Sb003060_Sorbi1    K K I A V P L E D G A L N G - - - - H A P R R R G P K K T V G M V I N G I E L D L A T I P T P V C S C T G A P Q Q C Y R
Sb022929_Sorbi1    K K A A V P V E D G A P N G - - - - H A P R R R G P K K T V G M V I N G I E L D L A N I P T P V C S C T G S P Q Q C Y R
Sb022928_Sorbi1    K K A A V P V E D G A P N G - - - - H A P R R R G P K K T V G M V I N G I E L D L A N I P T P V C S C T G S P Q Q C Y R
 
AT1G14685.3     W G C G G W Q S A C C T T N I S M H P L P M S T K R R G A R I S G R K M S Q G A F K K V L E K L A S D G F N F G N P I D
Sb003060_Sorbi1    W G P G G W Q S A C C T T S I S T Y P L P M S T K R R G A R I S G R K M S Q G A F K K V L E K L A G E G Y N L A N P I D
Sb022929_Sorbi1    W G A G G W Q S A C C T T S I S M Y P L P M S T K R R G A R I S G R K M S H G A F K K V L E K L A G E G Y N L A N P I N
Sb022928_Sorbi1    W G A G G W Q S A C C T T S I S M Y P L P M S T K R R G A R I S G R K M S H G A F K K V L E K L A G E G Y N L A N P I N
 
AT1G14685.3     L K S H W A R H G T N K F V T I R
Sb003060_Sorbi1    L K T F W A K H G T N K F V T I R
Sb022929_Sorbi1    L K T F W A K H G T N K F V T I R
Sb022928_Sorbi1    L K T F W A K H G T N K F V T I R
 
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