fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G24260.2 TETNKTLRLRLADGYQ at 168/250 in AT1G24260.1
TETNKTLRLRLADGYQ at 169/251 in AT1G24260.2
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb023523 WGVCGSLSLSLCVCVC in 32/401 AT1G24260.1 1st_not 0.553014553 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.505)


AT1G24260.2     ------MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKL
Sb023523_Sorbi1 LEGLGAMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKL
                      ******************************************************

AT1G24260.2     YEFCSSSSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRN
Sb023523_Sorbi1 YEFCSGQSITKTLERYEKSNYGGPDTAVQNKENELVQ-SSRNEYLKLKARVDNLQRTQRN
                *****..*: :*****:*.***.*:. * .:*   *: **::****** * * *******

AT1G24260.2     LLGEDLGPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLR
Sb023523_Sorbi1 LLGEDLGSLGIKELEQLEKQLDSSLRHIRSTRTQHMLDQLTDLQRREQMLCEANKCLRRK
                *******.*. ****.**:******::**: ***.*****.*** :*:** *:** ** :

AT1G24260.2     LAD-GYQMPLQLNPNQEEVDHYGRHHHQQQQHSQA----FFQPLE--CEPILQIGYQGQQ
Sb023523_Sorbi1 LEETSNQVHGQVWEHGANLLGYERHSPPQQAPSHVGNGLFFHPLEAAAEPTLQIGF----
                * : . *:  *:  :  ::  * **   **  *:.    **:***  .** ****:    

AT1G24260.2     DGMGAGPSVNNYMLGWLPYDTNSI
Sb023523_Sorbi1 ----APEHMNNFMPTWLP------
                    *   :**:*  ***
BoxShade v3.31 C (beta, 970507) Output
AT1G24260.2     - - - - - - M G R G R V E L K R I E N K I N R Q V T F A K R R N G L L K K A Y E L S V L C D A E V A L I I F S N R G K L
Sb023523_Sorbi1    L E G L G A M G R G R V E L K R I E N K I N R Q V T F A K R R N G L L K K A Y E L S V L C D A E V A L I I F S N R G K L
 
AT1G24260.2     Y E F C S S S S M L R T L E R Y Q K C N Y G A P E P N V P S R E A L A V E L S S Q Q E Y L K L K E R Y D A L Q R T Q R N
Sb023523_Sorbi1    Y E F C S G Q S I T K T L E R Y E K S N Y G G P D T A V Q N K E N E L V Q - S S R N E Y L K L K A R V D N L Q R T Q R N
 
AT1G24260.2     L L G E D L G P L S T K E L E S L E R Q L D S S L K Q I R A L R T Q F M L D Q L N D L Q S K E R M L T E T N K T L R L R
Sb023523_Sorbi1    L L G E D L G S L G I K E L E Q L E K Q L D S S L R H I R S T R T Q H M L D Q L T D L Q R R E Q M L C E A N K C L R R K
 
AT1G24260.2     L A D - G Y Q M P L Q L N P N Q E E V D H Y G R H H H Q Q Q Q H S Q A - - - - F F Q P L E - - C E P I L Q I G Y Q G Q Q
Sb023523_Sorbi1    L E E T S N Q V H G Q V W E H G A N L L G Y E R H S P P Q Q A P S H V G N G L F F H P L E A A A E P T L Q I G F - - - -
 
AT1G24260.2     D G M G A G P S V N N Y M L G W L P Y D T N S I
Sb023523_Sorbi1    - - - - A P E H M N N F M P T W L P - - - - - -
 
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