fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G46480.1 IIDNVTLELFPLHPEG at 239/251 in AT1G46480.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os019243 CTDEVTLELFPLHP in 224/232 AT1G46480.1 1st_1st 0.327058823 Ib
Sb014735 YTDDVTLELFPLRPQG in 232/245 AT1G46480.1 1st_1st 0.336470588 Ib
Gm014041 QEEHRTLELFPLHPEG in 219/230 AT1G46480.1 1st_1st 0.515294117 Ia
Gm008857 QEEHRTLELFPLHPEG in 213/224 AT1G46480.1 not_1st 0.508235294 II
Gm039397 EEEHRTLELFPLHPEG in 220/231 AT1G46480.1 not_1st 0.484705882 II
Gm039396 EEEHRTLELFPLHPEG in 220/231 AT1G46480.1 not_1st 0.484705882 II
Gm047993 EEEHRTLELFPLHPEG in 230/246 AT1G46480.1 not_1st 0.449411764 II
Pt017356 EEGDRTLELFPLHPEG in 202/213 AT1G46480.1 1st_1st 0.512941176 Ia
Pt039396 EKGDRTLELFPLHPEG in 202/213 AT1G46480.1 not_1st 0.503529411 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.505)


AT1G46480.1     ---MKVHEFSNGFSSSWDQHD-------STSSLS--------------LSCKRLRPLAPK
Sb014735_Sorbi1 ---MRLHHLHVAY---LDKAAAGSPPPSSPPSISLVASQSSSAAIPLALQQYCLRPLAPK
gm039397_Glyma1 ---MKVHQFARGF---WEHE----------PSLT--------------LGCKRLRPLAPK
gm008857_Glyma0 MGSMKVHQFTRGL--IWEHE----------PFLT--------------LGCKRLRPLAPK
pt039396_POPTR_ MGSMKVHQLARGF---WEHE----------PFLT--------------LGFKRLRPLAPK
Os019243_Os04t0 ---MRLHHLHVAY---LDHKASSSSSSPAPPSIS-PSSIPGSAAFP-AFSFKCLRPLAPK
gm047993_Glyma1 ---MKVHQFARGF---WEHE----------PSLT--------------LGCKRLRPLAPK
pt017356_POPTR_ MGSMKVHQLARGF---WEHE----------PSLT--------------LGCKRLRPLAPK
gm039396_Glyma1 ---MKVHQFARGF---WEHE----------PSLT--------------LGCKRLRPLAPK
gm014041_Glyma0 MGSMKVHQFTRGF--CWEHE----------PFLT--------------LGCKRLRPLAPK
                   *::*.:  .     ::           . ::              :    *******

AT1G46480.1     LSGS-----PP-SPPSSSSGVTSATFDLKNFIRPDQTG-P--------------------
Sb014735_Sorbi1 IS------------------------------FPE----ARKMVVL--------------
gm039397_Glyma1 LSNT-DTISPP-HHP-------VTTFDLKSFIKPESASRKLGIGSS--------------
gm008857_Glyma0 LPNT-KTIT--------------TPFDLKSFIRPESG--PRKPVSS--------------
pt039396_POPTR_ LANT-DHSA--------------ASFDLKSFIRPDSG--PRNLASS--------------
Os019243_Os04t0 IS------------------------------LPE----PRKMIAP--------------
gm047993_Glyma1 LSNTDDTISPPHHHP-------VTTLDLKSFIKPQ----KRPIFTSWPVYRWQLIHVHVY
pt017356_POPTR_ LANT-DHSV--------------TSFDLKSFIRPDSG--PRKLASS--------------
gm039396_Glyma1 LSNT-DTISPP-HHP-------VTTFDLKSFIKPESASRKLGIGSS--------------
gm014041_Glyma0 LPNT-QTNTIP-TTP-------SVPFDLKSFIRPESG--PRKPVSS--------------
                :.                               *:                         

AT1G46480.1     --TKFE--HKRDPPH---QLETH-P---GGTRWNPTQEQIGILEMLYKGGMRTPNAQQIE
Sb014735_Sorbi1 --PEFA--RVRNASSRLLNCTVQVPTAGGTTRWNPSPDQIRVLEMLYRGGMRTPNSFQIE
gm039397_Glyma1 --DDNT--NKRDPSSPQGQAETHIP---GGTRWNPTQEQIGILEMLYRGGMRTPNAQQIE
gm008857_Glyma0 --DD----TKKDPPSPQGQIETH-P---GGTRWNPTQEQIGILEMLYKGGMRTPNAQQIE
pt039396_POPTR_ --DE-----KKD--SPQG--ETH-P---GGTRWNPTQEQIGILEMLYRGGMRTPNGQQIE
Os019243_Os04t0 --PDFVVPRARNA-SKLLNYTVQVP-AAGTTRWNPSAEQIKVLEMLYRGGMRTPNSVQIE
gm047993_Glyma1 MIQKYM--IFRKP------VETHIP---GGTRWNPTQEQIGILEMLYRGGMRTPNAQQIE
pt017356_POPTR_ --DE-----KKD--SPQG--ETH-P---GGTRWNPTQEQIGILEMLYRGGMRTPNGQQIE
gm039396_Glyma1 --DDNT--NKRDPSSPQGQAETHIP---GGTRWNPTQEQIGILEMLYRGGMRTPNAQQIE
gm014041_Glyma0 --DD----SKKDPPSPQGQVETH-P---GGTRWNPTQEQIGILEMLYKGGIRTPNAQQIE
                   .      :.         .: *   * *****: :** :*****:**:****. ***

AT1G46480.1     HITLQLGKYGKIEGKNVFYWFQNHKARERQKQKRNNL-ISLSCQSSFTTTGVFNPSVTMK
Sb014735_Sorbi1 QITEELGKYGRIEGKNVFYWFQNHKARERQKQKRAAL-LTLSTTATSTLL----PL----
gm039397_Glyma1 QITAQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPRT-TLTT--SPP---FS
gm008857_Glyma0 QITVQLGKYGKIEGKNVFYWFQNHKARERQKQKRSSLASSHSPRTPTIHS----------
pt039396_POPTR_ DITAQLSRYGKIEGKNVFYWFQNHKARERQKQKRNSLGLSHSPRTPSPVT----------
Os019243_Os04t0 RITEELGKYGRIEGKNVFYWFQNHKARERQKQKRAAL-LTLSTLDPS-LL----PA----
gm047993_Glyma1 QITAQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSLRT-TPTTIVSHP---FS
pt017356_POPTR_ DITAQLSRYGKIEGKNVFYWFQNHKARERQKQKRNSLGLSHSPRTPSPIT----------
gm039396_Glyma1 QITAQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPRT-TLTT--SPP---FS
gm014041_Glyma0 QITVQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLAFSHSPRTHTIHS----------
                 ** :*.:**:***********************  *  : *                  

AT1G46480.1     TRTSSSLDIM-REPMVEKE-ELVEE--NEYKRTCRSWGFE------------NLEIENRR
Sb014735_Sorbi1 ---SPAAAETKDGVETKKE-EACEDA-SSRKRRCRTWDGDVVHGGGGDDA--AKEVADD-
gm039397_Glyma1 CCVITTMDTTKRGEVVERE-E--ED--SPLK-KCRSWAFE------------YLEDQR--
gm008857_Glyma0 ---VVTLETT-RGEVVERDHE--ED--SPYKKKCRRWVFD------------CLEEQNM-
pt039396_POPTR_ ---IISLD-T-RGEV---EGE--ED--SPYKRKCRSWTFE------------CLELED--
Os019243_Os04t0 ---T--ANETKEAPE-KKE-KDVEDGLASCKRRCKAW-GD---GAGDGDAVVATEAAGG-
gm047993_Glyma1 CSVITTLDTTKRGEIVERE-E--ED--SPLK-KCRSWAFE------------YLEDQR--
pt017356_POPTR_ ---IISLD-T-RGEV---EKD--ED--SPYKRKCRSWSFE------------CFELEE--
gm039396_Glyma1 CCVITTMDTTKRGEVVERE-E--ED--SPLK-KCRSWAFE------------YLEDQR--
gm014041_Glyma0 ---IVTLETT-RGEVVERDHE--ED--SPYKKKCRRWVFE------------CLEEQNM-
                                  : .  *:     *  *: *  :              *     

AT1G46480.1     NKNSSTMATTFNKIIDNVTLELFPLHPEGR-----
Sb014735_Sorbi1 ------------YYTDDVTLELFPLRPQGKAS---
gm039397_Glyma1 -------------EEEHRTLELFPLHPEGR-----
gm008857_Glyma0 --------SSPCEQEEHRTLELFPLHPEGR-----
pt039396_POPTR_ --------SRSCREKGDRTLELFPLHPEGR-----
Os019243_Os04t0 -------------CTDEVTLELFPLHP--------
gm047993_Glyma1 -------------EEEHRTLELFPLHPEGRRRGLF
pt017356_POPTR_ --------SRSCKEEGDRTLELFPLHPEGR-----
gm039396_Glyma1 -------------EEEHRTLELFPLHPEGR-----
gm014041_Glyma0 --------SSACEQEEHRTLELFPLHPEGR-----
                                . *******:*
BoxShade v3.31 C (beta, 970507) Output
AT1G46480.1     - - - M K V H E F S N G F S S S W D Q H D - - - - - - - S T S S L S - - - - - - - - - - - - - - L S C K R L R P L A P K
Sb014735_Sorbi1    - - - M R L H H L H V A Y - - - L D K A A A G S P P P S S P P S I S L V A S Q S S S A A I P L A L Q Q Y C L R P L A P K
gm039397_Glyma1    - - - M K V H Q F A R G F - - - W E H E - - - - - - - - - - P S L T - - - - - - - - - - - - - - L G C K R L R P L A P K
gm008857_Glyma0    M G S M K V H Q F T R G L - - I W E H E - - - - - - - - - - P F L T - - - - - - - - - - - - - - L G C K R L R P L A P K
pt039396_POPTR_    M G S M K V H Q L A R G F - - - W E H E - - - - - - - - - - P F L T - - - - - - - - - - - - - - L G F K R L R P L A P K
Os019243_Os04t0    - - - M R L H H L H V A Y - - - L D H K A S S S S S S P A P P S I S - P S S I P G S A A F P - A F S F K C L R P L A P K
gm047993_Glyma1    - - - M K V H Q F A R G F - - - W E H E - - - - - - - - - - P S L T - - - - - - - - - - - - - - L G C K R L R P L A P K
pt017356_POPTR_    M G S M K V H Q L A R G F - - - W E H E - - - - - - - - - - P S L T - - - - - - - - - - - - - - L G C K R L R P L A P K
gm039396_Glyma1    - - - M K V H Q F A R G F - - - W E H E - - - - - - - - - - P S L T - - - - - - - - - - - - - - L G C K R L R P L A P K
gm014041_Glyma0    M G S M K V H Q F T R G F - - C W E H E - - - - - - - - - - P F L T - - - - - - - - - - - - - - L G C K R L R P L A P K
 
AT1G46480.1     L S G S - - - - - P P - S P P S S S S G V T S A T F D L K N F I R P D Q T G - P - - - - - - - - - - - - - - - - - - - -
Sb014735_Sorbi1    I S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - F P E - - - - A R K M V V L - - - - - - - - - - - - - -
gm039397_Glyma1    L S N T - D T I S P P - H H P - - - - - - - V T T F D L K S F I K P E S A S R K L G I G S S - - - - - - - - - - - - - -
gm008857_Glyma0    L P N T - K T I T - - - - - - - - - - - - - - T P F D L K S F I R P E S G - - P R K P V S S - - - - - - - - - - - - - -
pt039396_POPTR_    L A N T - D H S A - - - - - - - - - - - - - - A S F D L K S F I R P D S G - - P R N L A S S - - - - - - - - - - - - - -
Os019243_Os04t0    I S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L P E - - - - P R K M I A P - - - - - - - - - - - - - -
gm047993_Glyma1    L S N T D D T I S P P H H H P - - - - - - - V T T L D L K S F I K P Q - - - - K R P I F T S W P V Y R W Q L I H V H V Y
pt017356_POPTR_    L A N T - D H S V - - - - - - - - - - - - - - T S F D L K S F I R P D S G - - P R K L A S S - - - - - - - - - - - - - -
gm039396_Glyma1    L S N T - D T I S P P - H H P - - - - - - - V T T F D L K S F I K P E S A S R K L G I G S S - - - - - - - - - - - - - -
gm014041_Glyma0    L P N T - Q T N T I P - T T P - - - - - - - S V P F D L K S F I R P E S G - - P R K P V S S - - - - - - - - - - - - - -
 
AT1G46480.1     - - T K F E - - H K R D P P H - - - Q L E T H - P - - - G G T R W N P T Q E Q I G I L E M L Y K G G M R T P N A Q Q I E
Sb014735_Sorbi1    - - P E F A - - R V R N A S S R L L N C T V Q V P T A G G T T R W N P S P D Q I R V L E M L Y R G G M R T P N S F Q I E
gm039397_Glyma1    - - D D N T - - N K R D P S S P Q G Q A E T H I P - - - G G T R W N P T Q E Q I G I L E M L Y R G G M R T P N A Q Q I E
gm008857_Glyma0    - - D D - - - - T K K D P P S P Q G Q I E T H - P - - - G G T R W N P T Q E Q I G I L E M L Y K G G M R T P N A Q Q I E
pt039396_POPTR_    - - D E - - - - - K K D - - S P Q G - - E T H - P - - - G G T R W N P T Q E Q I G I L E M L Y R G G M R T P N G Q Q I E
Os019243_Os04t0    - - P D F V V P R A R N A - S K L L N Y T V Q V P - A A G T T R W N P S A E Q I K V L E M L Y R G G M R T P N S V Q I E
gm047993_Glyma1    M I Q K Y M - - I F R K P - - - - - - V E T H I P - - - G G T R W N P T Q E Q I G I L E M L Y R G G M R T P N A Q Q I E
pt017356_POPTR_    - - D E - - - - - K K D - - S P Q G - - E T H - P - - - G G T R W N P T Q E Q I G I L E M L Y R G G M R T P N G Q Q I E
gm039396_Glyma1    - - D D N T - - N K R D P S S P Q G Q A E T H I P - - - G G T R W N P T Q E Q I G I L E M L Y R G G M R T P N A Q Q I E
gm014041_Glyma0    - - D D - - - - S K K D P P S P Q G Q V E T H - P - - - G G T R W N P T Q E Q I G I L E M L Y K G G I R T P N A Q Q I E
 
AT1G46480.1     H I T L Q L G K Y G K I E G K N V F Y W F Q N H K A R E R Q K Q K R N N L - I S L S C Q S S F T T T G V F N P S V T M K
Sb014735_Sorbi1    Q I T E E L G K Y G R I E G K N V F Y W F Q N H K A R E R Q K Q K R A A L - L T L S T T A T S T L L - - - - P L - - - -
gm039397_Glyma1    Q I T A Q L S K Y G K I E G K N V F Y W F Q N H K A R E R Q K Q K R N N L G L A H S P R T - T L T T - - S P P - - - F S
gm008857_Glyma0    Q I T V Q L G K Y G K I E G K N V F Y W F Q N H K A R E R Q K Q K R S S L A S S H S P R T P T I H S - - - - - - - - - -
pt039396_POPTR_    D I T A Q L S R Y G K I E G K N V F Y W F Q N H K A R E R Q K Q K R N S L G L S H S P R T P S P V T - - - - - - - - - -
Os019243_Os04t0    R I T E E L G K Y G R I E G K N V F Y W F Q N H K A R E R Q K Q K R A A L - L T L S T L D P S - L L - - - - P A - - - -
gm047993_Glyma1    Q I T A Q L S K Y G K I E G K N V F Y W F Q N H K A R E R Q K Q K R N N L G L A H S L R T - T P T T I V S H P - - - F S
pt017356_POPTR_    D I T A Q L S R Y G K I E G K N V F Y W F Q N H K A R E R Q K Q K R N S L G L S H S P R T P S P I T - - - - - - - - - -
gm039396_Glyma1    Q I T A Q L S K Y G K I E G K N V F Y W F Q N H K A R E R Q K Q K R N N L G L A H S P R T - T L T T - - S P P - - - F S
gm014041_Glyma0    Q I T V Q L G K Y G K I E G K N V F Y W F Q N H K A R E R Q K Q K R N S L A F S H S P R T H T I H S - - - - - - - - - -
 
AT1G46480.1     T R T S S S L D I M - R E P M V E K E - E L V E E - - N E Y K R T C R S W G F E - - - - - - - - - - - - N L E I E N R R
Sb014735_Sorbi1    - - - S P A A A E T K D G V E T K K E - E A C E D A - S S R K R R C R T W D G D V V H G G G G D D A - - A K E V A D D -
gm039397_Glyma1    C C V I T T M D T T K R G E V V E R E - E - - E D - - S P L K - K C R S W A F E - - - - - - - - - - - - Y L E D Q R - -
gm008857_Glyma0    - - - V V T L E T T - R G E V V E R D H E - - E D - - S P Y K K K C R R W V F D - - - - - - - - - - - - C L E E Q N M -
pt039396_POPTR_    - - - I I S L D - T - R G E V - - - E G E - - E D - - S P Y K R K C R S W T F E - - - - - - - - - - - - C L E L E D - -
Os019243_Os04t0    - - - T - - A N E T K E A P E - K K E - K D V E D G L A S C K R R C K A W - G D - - - G A G D G D A V V A T E A A G G -
gm047993_Glyma1    C S V I T T L D T T K R G E I V E R E - E - - E D - - S P L K - K C R S W A F E - - - - - - - - - - - - Y L E D Q R - -
pt017356_POPTR_    - - - I I S L D - T - R G E V - - - E K D - - E D - - S P Y K R K C R S W S F E - - - - - - - - - - - - C F E L E E - -
gm039396_Glyma1    C C V I T T M D T T K R G E V V E R E - E - - E D - - S P L K - K C R S W A F E - - - - - - - - - - - - Y L E D Q R - -
gm014041_Glyma0    - - - I V T L E T T - R G E V V E R D H E - - E D - - S P Y K K K C R R W V F E - - - - - - - - - - - - C L E E Q N M -
 
AT1G46480.1     N K N S S T M A T T F N K I I D N V T L E L F P L H P E G R - - - - -
Sb014735_Sorbi1    - - - - - - - - - - - - Y Y T D D V T L E L F P L R P Q G K A S - - -
gm039397_Glyma1    - - - - - - - - - - - - - E E E H R T L E L F P L H P E G R - - - - -
gm008857_Glyma0    - - - - - - - - S S P C E Q E E H R T L E L F P L H P E G R - - - - -
pt039396_POPTR_    - - - - - - - - S R S C R E K G D R T L E L F P L H P E G R - - - - -
Os019243_Os04t0    - - - - - - - - - - - - - C T D E V T L E L F P L H P - - - - - - - -
gm047993_Glyma1    - - - - - - - - - - - - - E E E H R T L E L F P L H P E G R R R G L F
pt017356_POPTR_    - - - - - - - - S R S C K E E G D R T L E L F P L H P E G R - - - - -
gm039396_Glyma1    - - - - - - - - - - - - - E E E H R T L E L F P L H P E G R - - - - -
gm014041_Glyma0    - - - - - - - - S S A C E Q E E H R T L E L F P L H P E G R - - - - -
 
0