fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G62360.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm023658 not found in 325aa AT1G62360.1 1st_1st 0.711805555 Ia
Pt019025 not found in 369aa AT1G62360.1 1st_1st 0.71875 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.505)


AT1G62360.1     MESGS---NST-SCPMAFAGDNSDGPMCPMMMMMPPIMTSHQHHGH-----DHQHQQQEH
gm023658_Glyma0 MEGGSSSSNGT-SYLLAF-GENNSGGLCPMTMM--PLVTSH-HAGYYFMESDHHH-----
pt019025_POPTR_ MEGGGAGCSSTPSLMMAF-GD-SSNGLCPMMMM--PLMSSS-SSAH-----QHHHQQQ--
                **.*.   ..* *  :** *: ... :*** **  *:::*    .:     :*:*     

AT1G62360.1     DGYAYQSHHQQSSSLFLQSLAPPQG--TKNKVASSSSPSSCAPAYSLMEIHH---NEIVA
gm023658_Glyma0 --------------------------------------------------HHHGNN----
pt019025_POPTR_ --HVNAGDSSISNTLFLP--LPPTNYQSQNRINNSASGSSM-----ILDDHNHNNNTVTA
                                                                  *:   *    

AT1G62360.1     GG-----INPCSSSSSSAS-VKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACSS
gm023658_Glyma0 -------NNNGSSSSSSSSAVKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACAS
pt019025_POPTR_ TGCYFMENNDGGSSSTS---VKAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEACAS
                        *  .***:*   ******************.*******************:*

AT1G62360.1     AAAAAASMGPTG--CLGEDPGLDQFMEAYCEMLVKYEQELSKPFKEAMVFLQRVECQFKS
gm023658_Glyma0 AATMAGGDAAAGSSCIGEDPALDQFMEAYCEMLTKYEQELSKPLKEAMLFLQRIECQFKN
pt019025_POPTR_ AASM----GPANTDGIGEDPALDQFMEAYCEMLTKYEQELSKPLKEAMVFLQRVECQFRA
                **:     ..:.   :****.************.*********:****:****:****: 

AT1G62360.1     LSLSSPSSFSGYGETAIDRNNNGSSEEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSL
gm023658_Glyma0 LTISSSDFASNEGG---DR--NGSSEEDVDLHN-MIDPQAEDRDLKGQLLRKYSGYLGSL
pt019025_POPTR_ LTLSSPNSAWGEGN---DR--NASSEEELDVNNKFIDPQAEDQELKGQLLRKYSGYLGSL
                *::**..   . *    **  *.****::*::* ::******::****************

AT1G62360.1     KQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQ
gm023658_Glyma0 KQEFMKKRKKGKLPKEARQQLLEWWNRHYKWPYPSESQKLALAESTGLDQKQINNWFINQ
pt019025_POPTR_ KKEFMKKRKKGKLPKEARQQLLDWWSRHHKWPYPSESQKLALAESTGLDQKQINNWFINQ
                *:********************:**.**:*******.***********************

AT1G62360.1     RKRHWKPSEDMQFVVMDATHPHHYFMDNVLGNPFPMDHISSTML
gm023658_Glyma0 RKRHWKPSEDMQFVVMDPSHP-HYYMDNVLGNPFPMD-LSHPML
pt019025_POPTR_ RKRHWKPSEDMQFVVMDAGHP-HYYMDNVLGNPFPMD-ISHTLL
                *****************. ** **:************ :* .:*
BoxShade v3.31 C (beta, 970507) Output
AT1G62360.1     M E S G S - - - N S T - S C P M A F A G D N S D G P M C P M M M M M P P I M T S H Q H H G H - - - - - D H Q H Q Q Q E H
gm023658_Glyma0    M E G G S S S S N G T - S Y L L A F - G E N N S G G L C P M T M M - - P L V T S H - H A G Y Y F M E S D H H H - - - - -
pt019025_POPTR_    M E G G G A G C S S T P S L M M A F - G D - S S N G L C P M M M M - - P L M S S S - S S A H - - - - - Q H H H Q Q Q - -
 
AT1G62360.1     D G Y A Y Q S H H Q Q S S S L F L Q S L A P P Q G - - T K N K V A S S S S P S S C A P A Y S L M E I H H - - - N E I V A
gm023658_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - H H H G N N - - - -
pt019025_POPTR_    - - H V N A G D S S I S N T L F L P - - L P P T N Y Q S Q N R I N N S A S G S S M - - - - - I L D D H N H N N N T V T A
 
AT1G62360.1     G G - - - - - I N P C S S S S S S A S - V K A K I M A H P H Y H R L L A A Y V N C Q K V G A P P E V V A R L E E A C S S
gm023658_Glyma0    - - - - - - - N N N G S S S S S S S S A V K A K I M A H P H Y H R L L A A Y V N C Q K V G A P P E V V A R L E E A C A S
pt019025_POPTR_    T G C Y F M E N N D G G S S S T S - - - V K A K I M A H P H Y H R L L A A Y A N C Q K V G A P P E V V A R L E E A C A S
 
AT1G62360.1     A A A A A A S M G P T G - - C L G E D P G L D Q F M E A Y C E M L V K Y E Q E L S K P F K E A M V F L Q R V E C Q F K S
gm023658_Glyma0    A A T M A G G D A A A G S S C I G E D P A L D Q F M E A Y C E M L T K Y E Q E L S K P L K E A M L F L Q R I E C Q F K N
pt019025_POPTR_    A A S M - - - - G P A N T D G I G E D P A L D Q F M E A Y C E M L T K Y E Q E L S K P L K E A M V F L Q R V E C Q F R A
 
AT1G62360.1     L S L S S P S S F S G Y G E T A I D R N N N G S S E E E V D M N N E F V D P Q A E D R E L K G Q L L R K Y S G Y L G S L
gm023658_Glyma0    L T I S S S D F A S N E G G - - - D R - - N G S S E E D V D L H N - M I D P Q A E D R D L K G Q L L R K Y S G Y L G S L
pt019025_POPTR_    L T L S S P N S A W G E G N - - - D R - - N A S S E E E L D V N N K F I D P Q A E D Q E L K G Q L L R K Y S G Y L G S L
 
AT1G62360.1     K Q E F M K K R K K G K L P K E A R Q Q L L D W W S R H Y K W P Y P S E Q Q K L A L A E S T G L D Q K Q I N N W F I N Q
gm023658_Glyma0    K Q E F M K K R K K G K L P K E A R Q Q L L E W W N R H Y K W P Y P S E S Q K L A L A E S T G L D Q K Q I N N W F I N Q
pt019025_POPTR_    K K E F M K K R K K G K L P K E A R Q Q L L D W W S R H H K W P Y P S E S Q K L A L A E S T G L D Q K Q I N N W F I N Q
 
AT1G62360.1     R K R H W K P S E D M Q F V V M D A T H P H H Y F M D N V L G N P F P M D H I S S T M L
gm023658_Glyma0    R K R H W K P S E D M Q F V V M D P S H P - H Y Y M D N V L G N P F P M D - L S H P M L
pt019025_POPTR_    R K R H W K P S E D M Q F V V M D A G H P - H Y Y M D N V L G N P F P M D - I S H T L L
 
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