fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G62360.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb022603 not found in 508aa AT4G08150.1 1st_not 0.491319444 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.505)


AT1G62360.1     --MESGSNSTSCPMAFAGDNSDGPMCPMMMMMPPIMTSHQHHGHDHQHQQQEHDGYAYQS
Sb022603_Sorbi1 LLLRSLARV--------------PFHPIHPGRPPVCRS-------------------FSS
                  :.* :.               *: *:    **:  *                   :.*

AT1G62360.1     HHQQ-----------SSSLFLQSLAPPQGTKNKVASSSSP------SSCAPAY-----SL
Sb022603_Sorbi1 MDQSFGNLGAGAGGGSSS---------GGSNSKAAVSSSSFLQLPLSTASPAYYGAPLAL
                 .*.           ***          *::.*.* ***.      *:.:***     :*

AT1G62360.1     MEIHHNEIVAGGINPCS------------------SSSSSASVKAKIMAHPHYHRLLAAY
Sb022603_Sorbi1 LHHHAAAVAAGGPGPSSSQQQQSPYATKHASTAEMSSAEAEAIKAKIVAHPQYSALLAAY
                :. *   :.*** .*.*                  **:.: ::****:***:*  *****

AT1G62360.1     VNCQKVGAPPEVVARLEEACSSAAAAAASMGPTG-CLGEDPGLDQFMEAYCEMLVKYEQE
Sb022603_Sorbi1 LDCQKVGAPPDVLERL-----TAMAAKLDARPPGRHEPRDPELDQFMEAYCNMLVKYREE
                ::********:*: **     :* **  .  *.*    .** *********:*****.:*

AT1G62360.1     LSKPFKEAMVFLQRVECQFKSLSLSSPSSFS-------GYGETAIDRNNNGSSEEEVDMN
Sb022603_Sorbi1 LTRPIDEAMEFLKRVEAQLDSISGGGGSSSSARLSLTDGKSEGV------GSSEDDMDPS
                *::*:.*** **:***.*:.*:* .. ** *       * .* .      ****:::* .

AT1G62360.1     NE-----FVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSR
Sb022603_Sorbi1 GRENDPPEIDPRAEDKELKYQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWEL
                ..      :**:***:*** ***:******.**:*** **:***********:**.**. 

AT1G62360.1     HYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHPHH---Y
Sb022603_Sorbi1 HYKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHWKPSEDMPFVMMEGFHPQNAAAL
                ********* :*:******************************* **:*:. **::    

AT1G62360.1     FMDNVLGNPFPMD---HISSTML
Sb022603_Sorbi1 YMD----GPFMADGMYRLGS---
                :**    .**  *   ::.*
BoxShade v3.31 C (beta, 970507) Output
AT1G62360.1     - - M E S G S N S T S C P M A F A G D N S D G P M C P M M M M M P P I M T S H Q H H G H D H Q H Q Q Q E H D G Y A Y Q S
Sb022603_Sorbi1    L L L R S L A R V - - - - - - - - - - - - - - P F H P I H P G R P P V C R S - - - - - - - - - - - - - - - - - - - F S S
 
AT1G62360.1     H H Q Q - - - - - - - - - - - S S S L F L Q S L A P P Q G T K N K V A S S S S P - - - - - - S S C A P A Y - - - - - S L
Sb022603_Sorbi1    M D Q S F G N L G A G A G G G S S S - - - - - - - - - G G S N S K A A V S S S S F L Q L P L S T A S P A Y Y G A P L A L
 
AT1G62360.1     M E I H H N E I V A G G I N P C S - - - - - - - - - - - - - - - - - - S S S S S A S V K A K I M A H P H Y H R L L A A Y
Sb022603_Sorbi1    L H H H A A A V A A G G P G P S S S Q Q Q Q S P Y A T K H A S T A E M S S A E A E A I K A K I V A H P Q Y S A L L A A Y
 
AT1G62360.1     V N C Q K V G A P P E V V A R L E E A C S S A A A A A A S M G P T G - C L G E D P G L D Q F M E A Y C E M L V K Y E Q E
Sb022603_Sorbi1    L D C Q K V G A P P D V L E R L - - - - - T A M A A K L D A R P P G R H E P R D P E L D Q F M E A Y C N M L V K Y R E E
 
AT1G62360.1     L S K P F K E A M V F L Q R V E C Q F K S L S L S S P S S F S - - - - - - - G Y G E T A I D R N N N G S S E E E V D M N
Sb022603_Sorbi1    L T R P I D E A M E F L K R V E A Q L D S I S G G G G S S S S A R L S L T D G K S E G V - - - - - - G S S E D D M D P S
 
AT1G62360.1     N E - - - - - F V D P Q A E D R E L K G Q L L R K Y S G Y L G S L K Q E F M K K R K K G K L P K E A R Q Q L L D W W S R
Sb022603_Sorbi1    G R E N D P P E I D P R A E D K E L K Y Q L L K K Y S G Y L S S L R Q E F S K K K K K G K L P K E A R Q K L L H W W E L
 
AT1G62360.1     H Y K W P Y P S E Q Q K L A L A E S T G L D Q K Q I N N W F I N Q R K R H W K P S E D M Q F V V M D A T H P H H - - - Y
Sb022603_Sorbi1    H Y K W P Y P S E T E K I A L A E S T G L D Q K Q I N N W F I N Q R K R H W K P S E D M P F V M M E G F H P Q N A A A L
 
AT1G62360.1     F M D N V L G N P F P M D - - - H I S S T M L
Sb022603_Sorbi1    Y M D - - - - G P F M A D G M Y R L G S - - -
 
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