fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G69120.1 AMRRNDLELTLEPVYN at 237/256 in AT1G69120.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt034808 not found in 248aa AT1G69120.1 not_1st 0.678496868 II
Pt004784 not found in 255aa AT1G69120.1 not_1st 0.542797494 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.505)


AT1G69120.1     MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD
pt034808_POPTR_ MGRGRVQLKRIENKINRQVTFSKRRTGLLKKANEISVLCDAEVALIVFSHKGKLFEYSTD
pt004784_POPTR_ MGRGRVQLKRIENNISRQVTFSKRRTGLLKKAHEISVLCDADVAVIVFSTKGKLFEYSTD
                *************:*.*********:******:********:**::*** **********

AT1G69120.1     SCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAM
pt034808_POPTR_ DSMEKILERYERYSYAERQLVATDLDSQGNWTLEYNRLKAKVELLQRNHRNYLGEDLDSM
pt004784_POPTR_ SSMESILERYERCSYAEQQFVPHGPEHQGSWFLEHPKLRARVELLQRNLRNYTGQDLDPL
                ..**.******* ****:*::.   : : .* :*: :*:*::***:** *:* *:**:.:

AT1G69120.1     SPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREKILR
pt034808_POPTR_ SLKELQNLEQQIDTALKHIRARKNHLMSQSISELQRKEKAIQVQNNMLVKQIKEKEKNDK
pt004784_POPTR_ SYKELQHLEQKIDTALKSVRSRKNQLVHESLAEMQKKEKALQDQNNILVEQVKKK---LK
                * ****:***::***** :*:***:*: :*: *:*:****:* **.:* :*:*::    :

AT1G69120.1     --AQQEQWDQQNQGHNMPPPLPPQQHQIQHPYMLSHQ---PSPFLNMGGLYQ--------
pt034808_POPTR_ ALAQPAFWDLQDHGPN------------ASSFLLSQPAGLPLPCLNIGGSHQ--------
pt004784_POPTR_ ALTEQAQWEQQNLGQNSSSFMLPQAQPPLQPSMLSH----PPP--TIGGSFQIRGFLNGN
                  ::   *: *: * *              . :**:    * *  .:** .*        

AT1G69120.1     -----EDDPMAMRRNDLELTLEPVYNCNLGCFAA
pt034808_POPTR_ -----EEAPEA-RRNELGHTLEPIYSFHLGGYGA
pt004784_POPTR_ KDVEVQTQPSTMPHWMLRHVNDRI----------
                     :  * :  :  *  . : :
BoxShade v3.31 C (beta, 970507) Output
AT1G69120.1     M G R G R V Q L K R I E N K I N R Q V T F S K R R A G L L K K A H E I S V L C D A E V A L V V F S H K G K L F E Y S T D
pt034808_POPTR_    M G R G R V Q L K R I E N K I N R Q V T F S K R R T G L L K K A N E I S V L C D A E V A L I V F S H K G K L F E Y S T D
pt004784_POPTR_    M G R G R V Q L K R I E N N I S R Q V T F S K R R T G L L K K A H E I S V L C D A D V A V I V F S T K G K L F E Y S T D
 
AT1G69120.1     S C M E K I L E R Y E R Y S Y A E R Q L I A P E S D V N T N W S M E Y N R L K A K I E L L E R N Q R H Y L G E D L Q A M
pt034808_POPTR_    D S M E K I L E R Y E R Y S Y A E R Q L V A T D L D S Q G N W T L E Y N R L K A K V E L L Q R N H R N Y L G E D L D S M
pt004784_POPTR_    S S M E S I L E R Y E R C S Y A E Q Q F V P H G P E H Q G S W F L E H P K L R A R V E L L Q R N L R N Y T G Q D L D P L
 
AT1G69120.1     S P K E L Q N L E Q Q L D T A L K H I R T R K N Q L M Y E S I N E L Q K K E K A I Q E Q N S M L S K Q I K E R E K I L R
pt034808_POPTR_    S L K E L Q N L E Q Q I D T A L K H I R A R K N H L M S Q S I S E L Q R K E K A I Q V Q N N M L V K Q I K E K E K N D K
pt004784_POPTR_    S Y K E L Q H L E Q K I D T A L K S V R S R K N Q L V H E S L A E M Q K K E K A L Q D Q N N I L V E Q V K K K - - - L K
 
AT1G69120.1     - - A Q Q E Q W D Q Q N Q G H N M P P P L P P Q Q H Q I Q H P Y M L S H Q - - - P S P F L N M G G L Y Q - - - - - - - -
pt034808_POPTR_    A L A Q P A F W D L Q D H G P N - - - - - - - - - - - - A S S F L L S Q P A G L P L P C L N I G G S H Q - - - - - - - -
pt004784_POPTR_    A L T E Q A Q W E Q Q N L G Q N S S S F M L P Q A Q P P L Q P S M L S H - - - - P P P - - T I G G S F Q I R G F L N G N
 
AT1G69120.1     - - - - - E D D P M A M R R N D L E L T L E P V Y N C N L G C F A A
pt034808_POPTR_    - - - - - E E A P E A - R R N E L G H T L E P I Y S F H L G G Y G A
pt004784_POPTR_    K D V E V Q T Q P S T M P H W M L R H V N D R I - - - - - - - - - -
 
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