fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G69120.1 AMRRNDLELTLEPVYN at 237/256 in AT1G69120.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb020213 not found in 285aa AT1G69120.1 1st_1st 0.561586638 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.505)


AT1G69120.1     MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD
Sb020213_Sorbi1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIIFSTKGKLYEYSTD
                ****:********************:*******************::** ****:*****

AT1G69120.1     SCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAM
Sb020213_Sorbi1 SCMDKILERYERYSYAEKVLISAESETQGNWCHEYRKLKAKVETIQKCQKHLMGEDLETL
                ***:*************: **:.**:.: **. **.:****:* ::: *:* :****:::

AT1G69120.1     SPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREKILR
Sb020213_Sorbi1 NLKELQQLEQQLESSLKHIRTRKSQLMLESISELQRKEKSLQEENKVLQKELAEKQKAQR
                . ****:*****:::********.*** ***.***:***::**:*.:*.*:: *::*  *

AT1G69120.1     AQQEQWDQQNQGHNMPP-----------------PL------------PPQQHQIQHPYM
Sb020213_Sorbi1 -QQVQRDQTQQQTSSSSSSFMIREAAPTTNISIFPVAAGGRVVEAAAAPPQARVGLPPWM
                 ** * ** :*  . ..                 *:            *** :    *:*

AT1G69120.1     LSHQPSPFLNMGGLYQEDDPMAMRRNDLELTLEPVYNCNLGCFAA
Sb020213_Sorbi1 LSH-------LSG--------------------------------
                ***       :.*
BoxShade v3.31 C (beta, 970507) Output
AT1G69120.1     M G R G R V Q L K R I E N K I N R Q V T F S K R R A G L L K K A H E I S V L C D A E V A L V V F S H K G K L F E Y S T D
Sb020213_Sorbi1    M G R G K V Q L K R I E N K I N R Q V T F S K R R S G L L K K A H E I S V L C D A E V A L I I F S T K G K L Y E Y S T D
 
AT1G69120.1     S C M E K I L E R Y E R Y S Y A E R Q L I A P E S D V N T N W S M E Y N R L K A K I E L L E R N Q R H Y L G E D L Q A M
Sb020213_Sorbi1    S C M D K I L E R Y E R Y S Y A E K V L I S A E S E T Q G N W C H E Y R K L K A K V E T I Q K C Q K H L M G E D L E T L
 
AT1G69120.1     S P K E L Q N L E Q Q L D T A L K H I R T R K N Q L M Y E S I N E L Q K K E K A I Q E Q N S M L S K Q I K E R E K I L R
Sb020213_Sorbi1    N L K E L Q Q L E Q Q L E S S L K H I R T R K S Q L M L E S I S E L Q R K E K S L Q E E N K V L Q K E L A E K Q K A Q R
 
AT1G69120.1     A Q Q E Q W D Q Q N Q G H N M P P - - - - - - - - - - - - - - - - - P L - - - - - - - - - - - - P P Q Q H Q I Q H P Y M
Sb020213_Sorbi1    - Q Q V Q R D Q T Q Q Q T S S S S S S F M I R E A A P T T N I S I F P V A A G G R V V E A A A A P P Q A R V G L P P W M
 
AT1G69120.1     L S H Q P S P F L N M G G L Y Q E D D P M A M R R N D L E L T L E P V Y N C N L G C F A A
Sb020213_Sorbi1    L S H - - - - - - - L S G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
0