fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G70920.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os002965 not found in 229aa AT2G01430.1 1st_not 0.482456140 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.505)


AT1G70920.1     MALSPNSSSLDLTISIPSFSPSPSLG-----DHHG----MRDFDINQTPKTEEDREWMIG
Os002965_Os01t0 MMGATSPSGLELTMAVPGLSSSGSEGAGCNNNNAGGGCNMRDLDINQPASGGEEEEFPMG
                *  :...*.*:**:::*.:*.* * *     :: *    ***:****...  *:.*: :*

AT1G70920.1     ATPHVNEDDSNSGGRRRKKLRLTKEQSHLLEESFIQNHTLTPKQKKDLATFLKLSQRQVE
Os002965_Os01t0 SVEEDEEERGVGGPHRPKKLRLSKEQSRLLEESFRLNHTLTPKQKEALAIKLKLRPRQVE
                :. . :*: . .* :* *****:****:******  *********: **  ***  ****

AT1G70920.1     VWFQNRRARSKLKHTEMECEYLKRWFGSLKEQNRRLQIEVEELRALK-------------
Os002965_Os01t0 VWFQNRRARTKLKQTEMECEYLKRCFGSLTEENRRLQREVEELRAMRVAPPTVLSPHTRQ
                *********:***:********** ****.*:***** *******::             

AT1G70920.1     PSSTSALTMCPRCERVTDAVDNDSNAVQEGAVLSSRSRMTISSSSSLC--------
Os002965_Os01t0 PLPASALTMCPRCERITAATG-------PPAVRPPPSSAAAAAPSPFHPRRPSAAF
                * .:***********:* *..         ** .. *  : ::.*.:
BoxShade v3.31 C (beta, 970507) Output
AT1G70920.1     M A L S P N S S S L D L T I S I P S F S P S P S L G - - - - - D H H G - - - - M R D F D I N Q T P K T E E D R E W M I G
Os002965_Os01t0    M M G A T S P S G L E L T M A V P G L S S S G S E G A G C N N N N A G G G C N M R D L D I N Q P A S G G E E E E F P M G
 
AT1G70920.1     A T P H V N E D D S N S G G R R R K K L R L T K E Q S H L L E E S F I Q N H T L T P K Q K K D L A T F L K L S Q R Q V E
Os002965_Os01t0    S V E E D E E E R G V G G P H R P K K L R L S K E Q S R L L E E S F R L N H T L T P K Q K E A L A I K L K L R P R Q V E
 
AT1G70920.1     V W F Q N R R A R S K L K H T E M E C E Y L K R W F G S L K E Q N R R L Q I E V E E L R A L K - - - - - - - - - - - - -
Os002965_Os01t0    V W F Q N R R A R T K L K Q T E M E C E Y L K R C F G S L T E E N R R L Q R E V E E L R A M R V A P P T V L S P H T R Q
 
AT1G70920.1     P S S T S A L T M C P R C E R V T D A V D N D S N A V Q E G A V L S S R S R M T I S S S S S L C - - - - - - - -
Os002965_Os01t0    P L P A S A L T M C P R C E R I T A A T G - - - - - - - P P A V R P P P S S A A A A A P S P F H P R R P S A A F
 
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