fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G70920.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm053547 not found in 179aa AT2G01430.1 not_not 0.476608187 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.505)


AT1G70920.1     MALSPNSSSLDLTISIPSFSPSPSLGDHHGMRDFDINQTPKTEEDREWMIGATPHVNEDD
gm053547_Glyma2 MA--------------------------SNMED------------------------EEE
                **                           .*.*                        *::

AT1G70920.1     SNSGGRRRKKLRLTKEQSHLLEESFIQNHTLTPKQKKDLATFLKLSQRQVEVWFQNRRAR
gm053547_Glyma2 GSNGDPPRKKLRLTKEQSRLLEESFRQNHTLNPKQKESLAMQLKLRPRQVEVWFQNRRAR
                ...*.  ***********:****** *****.****:.**  ***  *************

AT1G70920.1     SKLKHTEMECEYLKRWFGSLKEQNRRLQIEVEELRALK-------------PSSTSALTM
gm053547_Glyma2 SKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSM
                ****:***************.******* *******:*             * .:*:*:*

AT1G70920.1     CPRCERVTDAVD---NDSNAVQEGAVLSSRSRMTISSSSSLC-------
gm053547_Glyma2 CPRCERVTSTADKPPSAAAAAAAAATLSPKSPTPARHRPLLPLHHQWRN
                ********.:.*   . : *.  .*.**.:*  .    . *
BoxShade v3.31 C (beta, 970507) Output
AT1G70920.1     M A L S P N S S S L D L T I S I P S F S P S P S L G D H H G M R D F D I N Q T P K T E E D R E W M I G A T P H V N E D D
gm053547_Glyma2    M A - - - - - - - - - - - - - - - - - - - - - - - - - - S N M E D - - - - - - - - - - - - - - - - - - - - - - - - E E E
 
AT1G70920.1     S N S G G R R R K K L R L T K E Q S H L L E E S F I Q N H T L T P K Q K K D L A T F L K L S Q R Q V E V W F Q N R R A R
gm053547_Glyma2    G S N G D P P R K K L R L T K E Q S R L L E E S F R Q N H T L N P K Q K E S L A M Q L K L R P R Q V E V W F Q N R R A R
 
AT1G70920.1     S K L K H T E M E C E Y L K R W F G S L K E Q N R R L Q I E V E E L R A L K - - - - - - - - - - - - - P S S T S A L T M
gm053547_Glyma2    S K L K Q T E M E C E Y L K R W F G S L T E Q N R R L Q R E V E E L R A M K V G P P T V I S P H S C E P L P A S T L S M
 
AT1G70920.1     C P R C E R V T D A V D - - - N D S N A V Q E G A V L S S R S R M T I S S S S S L C - - - - - - -
gm053547_Glyma2    C P R C E R V T S T A D K P P S A A A A A A A A A T L S P K S P T P A R H R P L L P L H H Q W R N
 
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