fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G30130.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp026460 not found in 171aa AT1G31320.1 1st_not 0.563253012 II
Pp001908 not found in 171aa AT2G30130.1 not_1st 0.554216867 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G30130.1     ---MGGPGSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELP
pp026460_Pp1s19 MLSKMGSGMSPCAACKLLRRRCARDCVFAPYFPPDEPQKFANVHKVFGAANVNKMLHDLP
pp001908_Pp1s66 ---MAGSGMSPCAACKLLRRRCTRDCVFAPYFPPDEPQKFANVHKVFGAANVNKMLQELP
                     *.* ****:********::**:********:*:*** *******:**.***::**

AT2G30130.1     VHQRADAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEP
pp026460_Pp1s19 VHQRGDAVSSMVYEADARVRDPVYGCVGAISSLQQRIAFLQNQLAVANAEILCMRMQQA-
pp001908_Pp1s66 VEARGDAVSSMVYEADARVRDPVYGCVGAISSLQQQVAHLQTQLAVANAEIVCMRMHNTE
                *. *.***.*:*:**:*************** **:::: ** *****:***:*::*::  

AT2G30130.1     TLQSHHQVLELDQDHKALLLNNNNINNCNTNNNNNNFGYAMSSGQFNSNFASPSSIMQMQ
pp026460_Pp1s19 ---------------------------------ANNAPTLKVEPQATP----PSQPPEMS
pp001908_Pp1s66 -----------------------------SSRDSDNSRHIQGSYQQG-----------LS
                                                  :*      . *             :.

AT2G30130.1     MQMQMQDPLKQ------------------ESLWT
pp026460_Pp1s19 SPLQPQSPELQHHHKPC-----TNASESGEAVWT
pp001908_Pp1s66 PPLQPQSPELQNYYKPTAHYHRTDNMELAELLWT
                  :* *.*  *                  * :**
BoxShade v3.31 C (beta, 970507) Output
AT2G30130.1     - - - M G G P G S S P C A S C K L L R R R C A K D C I F A P Y F P P D D P H K F A I V H K V F G A S N V S K M L Q E L P
pp026460_Pp1s19    M L S K M G S G M S P C A A C K L L R R R C A R D C V F A P Y F P P D E P Q K F A N V H K V F G A A N V N K M L H D L P
pp001908_Pp1s66    - - - M A G S G M S P C A A C K L L R R R C T R D C V F A P Y F P P D E P Q K F A N V H K V F G A A N V N K M L Q E L P
 
AT2G30130.1     V H Q R A D A V N S L V F E A N A R V R D P V Y G C V G A I S Y L Q N Q V S Q L Q M Q L A V A Q A E I L C I Q M Q N E P
pp026460_Pp1s19    V H Q R G D A V S S M V Y E A D A R V R D P V Y G C V G A I S S L Q Q R I A F L Q N Q L A V A N A E I L C M R M Q Q A -
pp001908_Pp1s66    V E A R G D A V S S M V Y E A D A R V R D P V Y G C V G A I S S L Q Q Q V A H L Q T Q L A V A N A E I V C M R M H N T E
 
AT2G30130.1     T L Q S H H Q V L E L D Q D H K A L L L N N N N I N N C N T N N N N N N F G Y A M S S G Q F N S N F A S P S S I M Q M Q
pp026460_Pp1s19    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A N N A P T L K V E P Q A T P - - - - P S Q P P E M S
pp001908_Pp1s66    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S S R D S D N S R H I Q G S Y Q Q G - - - - - - - - - - - L S
 
AT2G30130.1     M Q M Q M Q D P L K Q - - - - - - - - - - - - - - - - - - E S L W T
pp026460_Pp1s19    S P L Q P Q S P E L Q H H H K P C - - - - - T N A S E S G E A V W T
pp001908_Pp1s66    P P L Q P Q S P E L Q N Y Y K P T A H Y H R T D N M E L A E L L W T
 
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