fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G30130.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt020927 not found in 163aa AT2G30130.1 not_1st 0.716867469 II
Pt042518 not found in 234aa AT2G30130.1 not_1st 0.683734939 II
Pt033656 not found in 164aa AT2G30130.1 not_1st 0.671686746 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G30130.1     ------------------------------------------------------------
pt042518_POPTR_ MAHQLYLITKTIVNVHNFGFDHRELSEKEKKKGGVQVPSSVISETSSHLLLGLLPLFPLH
pt033656_POPTR_ ------------------------------------------------------------
pt020927_POPTR_ ------------------------------------------------------------
                                                                            

AT2G30130.1     ----------MGGPGSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVS
pt042518_POPTR_ NSEHFFFTNKMG--GNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVS
pt033656_POPTR_ ----------MG--GNSPCASCKLLRRRCAKDCIFSPYFPSDDPHKFAIVHKVFGASNVS
pt020927_POPTR_ ----------MG--GSSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVS
                          **  *.*******************:****.*******************

AT2G30130.1     KMLQELPVHQRADAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILC
pt042518_POPTR_ KMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILC
pt033656_POPTR_ KMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILC
pt020927_POPTR_ KMLQEIPFHQRVDAVSSLVYEANARVRDPVYGCVGAISYLQNQVSQLQIQLAATQAEMNC
                *****:*.***.***.***:****************************:***.:***: *

AT2G30130.1     IQMQNEPTLQSHHQVLELDQ-DHKALLLNNNNINNCNTNNNNNNFGYAMSSGQFNSNFAS
pt042518_POPTR_ IQMQHEPVMPTP----QMDP-EDKSFLLQNSL---------PQYL-----------NFGS
pt033656_POPTR_ IQMQHEPVMPTS----QMGPDDDKSFLLQNSL---------SQYL-----------NYGS
pt020927_POPTR_ IQMQQEPTLPT-----QLDQ-DEKALLLASSN----NFNNIPQYF-----------NFAS
                ****:**.: :     ::.  :.*::** ..           : :           *:.*

AT2G30130.1     PSSIMQMQMQMQM-QDPLKQESLWT----
pt042518_POPTR_ SSNV--------IQYDSLKRETIFEDMIS
pt033656_POPTR_ SSNA--------I-HDSLKRESIFGDMIS
pt020927_POPTR_ SSNV--------I-QDPLKRESLWT----
                .*.         :  *.**:*:::
BoxShade v3.31 C (beta, 970507) Output
AT2G30130.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt042518_POPTR_    M A H Q L Y L I T K T I V N V H N F G F D H R E L S E K E K K K G G V Q V P S S V I S E T S S H L L L G L L P L F P L H
pt033656_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt020927_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT2G30130.1     - - - - - - - - - - M G G P G S S P C A S C K L L R R R C A K D C I F A P Y F P P D D P H K F A I V H K V F G A S N V S
pt042518_POPTR_    N S E H F F F T N K M G - - G N S P C A S C K L L R R R C A K D C I F A P Y F P S D D P H K F A I V H K V F G A S N V S
pt033656_POPTR_    - - - - - - - - - - M G - - G N S P C A S C K L L R R R C A K D C I F S P Y F P S D D P H K F A I V H K V F G A S N V S
pt020927_POPTR_    - - - - - - - - - - M G - - G S S P C A S C K L L R R R C A K D C I F A P Y F P S D D P H K F A I V H K V F G A S N V S
 
AT2G30130.1     K M L Q E L P V H Q R A D A V N S L V F E A N A R V R D P V Y G C V G A I S Y L Q N Q V S Q L Q M Q L A V A Q A E I L C
pt042518_POPTR_    K M L Q E L P V H Q R A D A V S S L V Y E A N A R V R D P V Y G C V G A I S Y L Q N Q V S Q L Q M Q L A V A Q A E I L C
pt033656_POPTR_    K M L Q E L P V H Q R A D A V S S L V Y E A N A R V R D P V Y G C V G A I S Y L Q N Q V S Q L Q M Q L A V A Q A E I L C
pt020927_POPTR_    K M L Q E I P F H Q R V D A V S S L V Y E A N A R V R D P V Y G C V G A I S Y L Q N Q V S Q L Q I Q L A A T Q A E M N C
 
AT2G30130.1     I Q M Q N E P T L Q S H H Q V L E L D Q - D H K A L L L N N N N I N N C N T N N N N N N F G Y A M S S G Q F N S N F A S
pt042518_POPTR_    I Q M Q H E P V M P T P - - - - Q M D P - E D K S F L L Q N S L - - - - - - - - - P Q Y L - - - - - - - - - - - N F G S
pt033656_POPTR_    I Q M Q H E P V M P T S - - - - Q M G P D D D K S F L L Q N S L - - - - - - - - - S Q Y L - - - - - - - - - - - N Y G S
pt020927_POPTR_    I Q M Q Q E P T L P T - - - - - Q L D Q - D E K A L L L A S S N - - - - N F N N I P Q Y F - - - - - - - - - - - N F A S
 
AT2G30130.1     P S S I M Q M Q M Q M Q M - Q D P L K Q E S L W T - - - -
pt042518_POPTR_    S S N V - - - - - - - - I Q Y D S L K R E T I F E D M I S
pt033656_POPTR_    S S N A - - - - - - - - I - H D S L K R E S I F G D M I S
pt020927_POPTR_    S S N V - - - - - - - - I - Q D P L K R E S L W T - - - -
 
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