fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G30130.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb016397 not found in 182aa AT2G30130.1 not_1st 0.536144578 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G30130.1     MGGPGSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQ
Sb016397_Sorbi1 -----------------RCTQECVFAPYFPPEDPHKFAIVHKVFGASNVSKMLQELPAQQ
                                 **:::*:*******:*************************.:*

AT2G30130.1     RADAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNE----
Sb016397_Sorbi1 RADAVSSLVYEANARMRDPVYGCVGAISYLQQQVSQLQVQLALAKAEILCVQMQHDESAS
                *****.***:*****:***************:******:***:*:*****:***::    

AT2G30130.1     ------PTLQS----HHQVLELDQDHKALLLNNNNINNCNTNNNNNNFGYAMSSGQFNSN
Sb016397_Sorbi1 AAAAPAPAKQQLHHHHHQQEEMECEAYGSLLVQNGL----MMNTLNSTGAVHHQQQMLGS
                      *: *.    ***  *:: :  . ** :*.:      *. *. * .  . *: ..

AT2G30130.1     FASPSSIMQMQMQMQMQDP-LKQESLWT
Sb016397_Sorbi1 FGSAGN-----TAMMLQEACLKKETLWA
                *.*...       * :*:. **:*:**:
BoxShade v3.31 C (beta, 970507) Output
AT2G30130.1     M G G P G S S P C A S C K L L R R R C A K D C I F A P Y F P P D D P H K F A I V H K V F G A S N V S K M L Q E L P V H Q
Sb016397_Sorbi1    - - - - - - - - - - - - - - - - - R C T Q E C V F A P Y F P P E D P H K F A I V H K V F G A S N V S K M L Q E L P A Q Q
 
AT2G30130.1     R A D A V N S L V F E A N A R V R D P V Y G C V G A I S Y L Q N Q V S Q L Q M Q L A V A Q A E I L C I Q M Q N E - - - -
Sb016397_Sorbi1    R A D A V S S L V Y E A N A R M R D P V Y G C V G A I S Y L Q Q Q V S Q L Q V Q L A L A K A E I L C V Q M Q H D E S A S
 
AT2G30130.1     - - - - - - P T L Q S - - - - H H Q V L E L D Q D H K A L L L N N N N I N N C N T N N N N N N F G Y A M S S G Q F N S N
Sb016397_Sorbi1    A A A A P A P A K Q Q L H H H H H Q Q E E M E C E A Y G S L L V Q N G L - - - - M M N T L N S T G A V H H Q Q Q M L G S
 
AT2G30130.1     F A S P S S I M Q M Q M Q M Q M Q D P - L K Q E S L W T
Sb016397_Sorbi1    F G S A G N - - - - - T A M M L Q E A C L K K E T L W A
 
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