fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G30130.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm039058 not found in 153aa AT2G30130.1 not_1st 0.665662650 II
Gm048790 not found in 172aa AT2G30130.1 not_1st 0.662650602 II
Gm005177 not found in 154aa AT2G30130.1 not_1st 0.659638554 II
Gm048472 not found in 165aa AT2G30130.1 not_1st 0.632530120 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G30130.1     MGGPGSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQ
gm005177_Glyma0 MG--GNSPCASCKLLRRRCTKDCIFAPYFPSDDPQKFAIVHKVFGASNVSKMLQELPVHQ
gm048790_Glyma1 MG--GTSPCASCKLLRRRCSKECIFAPYFPSDDPRKFAIVHKVFGASNISKMLQELPIHQ
gm048472_Glyma1 MA--GNSPCASCKLLRRRCTKDCIFAPYFPSNDPQKFALVHKVFGASNVSKMLQELPAHQ
gm039058_Glyma1 MG--GNSPCASCKLLRRRCTKDCTFAPYFPSDDPQKFAIVHKVFGASNVSKMLQELPVHQ
                *.  *.*************:*:* ******.:**:***:*********:******** **

AT2G30130.1     RADAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQM-QNEPTL
gm005177_Glyma0 RADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSELQMQLAVAQAEILCIQM-EHEPVM
gm048790_Glyma1 RADAVSSLVYEANARVRDPVYGSVGAISYLQSQVSQLQMQLAVAQAEILCIQMQQQEPTL
gm048472_Glyma1 RGDAVSSLVYEAHARVRDPVYGCVGAISHLQNQVSELQMQLAVAQAEILCIQM-QQEPLM
gm039058_Glyma1 RADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSELQMQLAVAQAEILCIQM-EHEPVM
                *.***.***:**:*********.*****:**.***:***************** ::** :

AT2G30130.1     QSHHQVLELDQDHKALLLNNNNINNCNTNNNNNNFGYAMSSGQFNSNF----ASPSSIMQ
gm005177_Glyma0 PAASGI---DLDYKSYFLQND-------------------LSQF-LGF----DTSSNVM-
gm048790_Glyma1 A-TQLV---DQDDKSMLLSVNN-----------NY---EMLPQF-LNFPSSSSSSSNIFQ
gm048472_Glyma1 PNPEME---DPDQKSYLLQNE-------------------LPQY-LNY----ASSSNVI-
gm039058_Glyma1 P-ASQI---DLDHKSYFLQND-------------------LSQF-LAF----DSSSNVM-
                         * * *: :*. :                     *:   :     :.*.:: 

AT2G30130.1     MQMQMQMQDPLKQESLWT-----
gm005177_Glyma0 --------QQFCP----------
gm048790_Glyma1 -----DPHEPLKRESFWT-----
gm048472_Glyma1 -------YDSFSRESIFGHDMVS
gm039058_Glyma1 --------QQFCP----------
                        : :
BoxShade v3.31 C (beta, 970507) Output
AT2G30130.1     M G G P G S S P C A S C K L L R R R C A K D C I F A P Y F P P D D P H K F A I V H K V F G A S N V S K M L Q E L P V H Q
gm005177_Glyma0    M G - - G N S P C A S C K L L R R R C T K D C I F A P Y F P S D D P Q K F A I V H K V F G A S N V S K M L Q E L P V H Q
gm048790_Glyma1    M G - - G T S P C A S C K L L R R R C S K E C I F A P Y F P S D D P R K F A I V H K V F G A S N I S K M L Q E L P I H Q
gm048472_Glyma1    M A - - G N S P C A S C K L L R R R C T K D C I F A P Y F P S N D P Q K F A L V H K V F G A S N V S K M L Q E L P A H Q
gm039058_Glyma1    M G - - G N S P C A S C K L L R R R C T K D C T F A P Y F P S D D P Q K F A I V H K V F G A S N V S K M L Q E L P V H Q
 
AT2G30130.1     R A D A V N S L V F E A N A R V R D P V Y G C V G A I S Y L Q N Q V S Q L Q M Q L A V A Q A E I L C I Q M - Q N E P T L
gm005177_Glyma0    R A D A V S S L V Y E A N A R V R D P V Y G C V G A I S Y L Q N Q V S E L Q M Q L A V A Q A E I L C I Q M - E H E P V M
gm048790_Glyma1    R A D A V S S L V Y E A N A R V R D P V Y G S V G A I S Y L Q S Q V S Q L Q M Q L A V A Q A E I L C I Q M Q Q Q E P T L
gm048472_Glyma1    R G D A V S S L V Y E A H A R V R D P V Y G C V G A I S H L Q N Q V S E L Q M Q L A V A Q A E I L C I Q M - Q Q E P L M
gm039058_Glyma1    R A D A V S S L V Y E A N A R V R D P V Y G C V G A I S Y L Q N Q V S E L Q M Q L A V A Q A E I L C I Q M - E H E P V M
 
AT2G30130.1     Q S H H Q V L E L D Q D H K A L L L N N N N I N N C N T N N N N N N F G Y A M S S G Q F N S N F - - - - A S P S S I M Q
gm005177_Glyma0    P A A S G I - - - D L D Y K S Y F L Q N D - - - - - - - - - - - - - - - - - - - L S Q F - L G F - - - - D T S S N V M -
gm048790_Glyma1    A - T Q L V - - - D Q D D K S M L L S V N N - - - - - - - - - - - N Y - - - E M L P Q F - L N F P S S S S S S S N I F Q
gm048472_Glyma1    P N P E M E - - - D P D Q K S Y L L Q N E - - - - - - - - - - - - - - - - - - - L P Q Y - L N Y - - - - A S S S N V I -
gm039058_Glyma1    P - A S Q I - - - D L D H K S Y F L Q N D - - - - - - - - - - - - - - - - - - - L S Q F - L A F - - - - D S S S N V M -
 
AT2G30130.1     M Q M Q M Q M Q D P L K Q E S L W T - - - - -
gm005177_Glyma0    - - - - - - - - Q Q F C P - - - - - - - - - -
gm048790_Glyma1    - - - - - D P H E P L K R E S F W T - - - - -
gm048472_Glyma1    - - - - - - - Y D S F S R E S I F G H D M V S
gm039058_Glyma1    - - - - - - - - Q Q F C P - - - - - - - - - -
 
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