fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G30130.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm031502 not found in 172aa AT2G30130.1 1st_1st 0.671686746 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G30130.1     MGGPGSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQ
gm031502_Glyma1 MG--GTSPCASCKLLRRRCSKDCIFAPYFPSDDPRKFSIVHKVFGASNISKMLQELPIHQ
                **  *:*************:**********.***:**:**********:********:**

AT2G30130.1     RADAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQM-QNEPTL
gm031502_Glyma1 RADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQTEILCIQMQQQEPTL
                *****.***:***********************************:******* *:****

AT2G30130.1     QSHHQVLELDQDHKALLLNNNNINNCNTNNNNNNFGYAMSSGQFNSNFASPSSIMQMQMQ
gm031502_Glyma1 ATQL----VDQDDKSMLL-----------SVNNNYEMLPQFLKFPSSSSSSSNVFQ----
                 ::     :***.*::**           . ***:    .  :* *. :*.*.::*    

AT2G30130.1     MQMQDPLKQESLWT
gm031502_Glyma1 -DPHEPLKRESFWT
                 : ::***:**:**
BoxShade v3.31 C (beta, 970507) Output
AT2G30130.1     M G G P G S S P C A S C K L L R R R C A K D C I F A P Y F P P D D P H K F A I V H K V F G A S N V S K M L Q E L P V H Q
gm031502_Glyma1    M G - - G T S P C A S C K L L R R R C S K D C I F A P Y F P S D D P R K F S I V H K V F G A S N I S K M L Q E L P I H Q
 
AT2G30130.1     R A D A V N S L V F E A N A R V R D P V Y G C V G A I S Y L Q N Q V S Q L Q M Q L A V A Q A E I L C I Q M - Q N E P T L
gm031502_Glyma1    R A D A V S S L V Y E A N A R V R D P V Y G C V G A I S Y L Q N Q V S Q L Q M Q L A V A Q T E I L C I Q M Q Q Q E P T L
 
AT2G30130.1     Q S H H Q V L E L D Q D H K A L L L N N N N I N N C N T N N N N N N F G Y A M S S G Q F N S N F A S P S S I M Q M Q M Q
gm031502_Glyma1    A T Q L - - - - V D Q D D K S M L L - - - - - - - - - - - S V N N N Y E M L P Q F L K F P S S S S S S S N V F Q - - - -
 
AT2G30130.1     M Q M Q D P L K Q E S L W T
gm031502_Glyma1    - D P H E P L K R E S F W T
 
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