fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G42830.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp037718 QTSQTSLHLGLFPKSH in 290/331 AT2G42830.1 1st_1st 0.343680709 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.505)


AT2G42830.1     ---------------------------------MEGGASNEVAESSKK------------
pp037718_Pp1s20 MTVSGQNKSLCFSLSLNSSNRGSLELLGRGVDSSSGGRDAVTADSSSPGVGKEDPPKERE
                                                  .** .  .*:**.             

AT2G42830.1     --IGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYA
pp037718_Pp1s20 VVMGRGKIEIKKIENPTSRQVTFSKRRGGLLKKAHELAVLCDAEVALIIFSSTGKLFEFA
                  :********:***.*.*****.***.******:**:*********:***: *:*:*:*

AT2G42830.1     NN-SVRGTIERYKKACSDAVNPPTITEANTQYYQQEASKLRRQIRDIQNLNRHILGESLG
pp037718_Pp1s20 SSGSMRDILERYSK-CPDGVQ----TDGNSDFMGREVVKLRQQLERLQHSQRHMLGEDLQ
                .. *:*. :***.* *.*.*:    *:.*:::  :*. ***:*:. :*: :**:***.* 

AT2G42830.1     SLNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQNDNMYLRSKITERTGL
pp037718_Pp1s20 VLTVPDLLQLEQQLDMGVSRVRARKNQLLLEEVEELRRKEHDLQAANEELRQKLADAKGM
                 *.. :* :**.:*: *:****::*:::*: *:* ::::* :**  *  **.*::: .*:

AT2G42830.1     QQQESSVIHQGT------------VYESGVTSSHQS----------------------GQ
pp037718_Pp1s20 LTLEAGTARAGTSESPGDQGGSWPTREVGGITQHQAITTFPAHLNLRDPQTSQTSLHLGL
                   *:.. : **            . * *  :.**:                      * 

AT2G42830.1     YNRNYIAVNLLEPNQNSSNQDQPPLQLV---------
pp037718_Pp1s20 FPKSHMPSASRRPSQQSPTEPE-GIEFVYICVDNWCR
                : :.::.    .*.*:*..: :  :::*
BoxShade v3.31 C (beta, 970507) Output
AT2G42830.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E G G A S N E V A E S S K K - - - - - - - - - - - -
pp037718_Pp1s20    M T V S G Q N K S L C F S L S L N S S N R G S L E L L G R G V D S S S G G R D A V T A D S S S P G V G K E D P P K E R E
 
AT2G42830.1     - - I G R G K I E I K R I E N T T N R Q V T F C K R R N G L L K K A Y E L S V L C D A E V A L V I F S T R G R L Y E Y A
pp037718_Pp1s20    V V M G R G K I E I K K I E N P T S R Q V T F S K R R G G L L K K A H E L A V L C D A E V A L I I F S S T G K L F E F A
 
AT2G42830.1     N N - S V R G T I E R Y K K A C S D A V N P P T I T E A N T Q Y Y Q Q E A S K L R R Q I R D I Q N L N R H I L G E S L G
pp037718_Pp1s20    S S G S M R D I L E R Y S K - C P D G V Q - - - - T D G N S D F M G R E V V K L R Q Q L E R L Q H S Q R H M L G E D L Q
 
AT2G42830.1     S L N F K E L K N L E S R L E K G I S R V R S K K H E M L V A E I E Y M Q K R E I E L Q N D N M Y L R S K I T E R T G L
pp037718_Pp1s20    V L T V P D L L Q L E Q Q L D M G V S R V R A R K N Q L L L E E V E E L R R K E H D L Q A A N E E L R Q K L A D A K G M
 
AT2G42830.1     Q Q Q E S S V I H Q G T - - - - - - - - - - - - V Y E S G V T S S H Q S - - - - - - - - - - - - - - - - - - - - - - G Q
pp037718_Pp1s20    L T L E A G T A R A G T S E S P G D Q G G S W P T R E V G G I T Q H Q A I T T F P A H L N L R D P Q T S Q T S L H L G L
 
AT2G42830.1     Y N R N Y I A V N L L E P N Q N S S N Q D Q P P L Q L V - - - - - - - - -
pp037718_Pp1s20    F P K S H M P S A S R R P S Q Q S P T E P E - G I E F V Y I C V D N W C R
 
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