fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G42830.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt019599 not found in 241aa AT4G18960.1 1st_not 0.580931263 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.505)


AT2G42830.1     MEGGASNEVAESS--KKIGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV
pt019599_POPTR_ ME--YQNESLESSPLRKLGRGKVEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEV
                **   .**  ***  :*:****:*******************.*****************

AT2G42830.1     ALVIFSTRGRLYEYANNSVRGTIERYKKACSDAVNPPTITEANTQYYQQEASKLRRQIRD
pt019599_POPTR_ ALIVFSSRGRLYEYSNDSVKSTIERYKKASADSSNTGSVSEANAQYYQQEAAKLRSQIGN
                **::**:*******:*:**:.********.:*: *. :::***:*******:*** ** :

AT2G42830.1     IQNLNRHILGESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQND
pt019599_POPTR_ LQNSNRHMLGEALSSLSVKELKSLEIRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNN
                :** ***:***:*.**..****.** ********:****:*:*.**********::*:*:

AT2G42830.1     NMYLRSKITERTGLQQQESSVIHQGTVYESGVTSSHQSGQYN-RNYIAVNLLEPNQNSSN
pt019599_POPTR_ NQLLRAKISENE-RKRQSMNLMPGGADFE-----IVQSQPYDSRNYSQVNGLQPASHYSH
                *  **:**:*.   ::*. .::  *: :*       **  *: ***  ** *:* .: *:

AT2G42830.1     QDQPPLQLV
pt019599_POPTR_ QDQMALQLV
                *** .****
BoxShade v3.31 C (beta, 970507) Output
AT2G42830.1     M E G G A S N E V A E S S - - K K I G R G K I E I K R I E N T T N R Q V T F C K R R N G L L K K A Y E L S V L C D A E V
pt019599_POPTR_    M E - - Y Q N E S L E S S P L R K L G R G K V E I K R I E N T T N R Q V T F C K R R S G L L K K A Y E L S V L C D A E V
 
AT2G42830.1     A L V I F S T R G R L Y E Y A N N S V R G T I E R Y K K A C S D A V N P P T I T E A N T Q Y Y Q Q E A S K L R R Q I R D
pt019599_POPTR_    A L I V F S S R G R L Y E Y S N D S V K S T I E R Y K K A S A D S S N T G S V S E A N A Q Y Y Q Q E A A K L R S Q I G N
 
AT2G42830.1     I Q N L N R H I L G E S L G S L N F K E L K N L E S R L E K G I S R V R S K K H E M L V A E I E Y M Q K R E I E L Q N D
pt019599_POPTR_    L Q N S N R H M L G E A L S S L S V K E L K S L E I R L E K G I S R I R S K K N E L L F A E I E Y M Q K R E V D L H N N
 
AT2G42830.1     N M Y L R S K I T E R T G L Q Q Q E S S V I H Q G T V Y E S G V T S S H Q S G Q Y N - R N Y I A V N L L E P N Q N S S N
pt019599_POPTR_    N Q L L R A K I S E N E - R K R Q S M N L M P G G A D F E - - - - - I V Q S Q P Y D S R N Y S Q V N G L Q P A S H Y S H
 
AT2G42830.1     Q D Q P P L Q L V
pt019599_POPTR_    Q D Q M A L Q L V
 
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