fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G42830.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb009126 not found in 277aa AT4G18960.1 not_not 0.512195121 III
Sb031546 not found in 374aa AT3G58780.1 not_not 0.498891352 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.505)


AT2G42830.1     MEGGASNEVAESSKKIGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL
Sb031546_Sorbi1 -----QREEQAAISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVAL
Sb009126_Sorbi1 ---------------MGRGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSILCDAEIAL
                               :***:********.*.********************:*****:**

AT2G42830.1     VIFSTRGRLYEYANNSVRGTIERYKK--ACSDAVNPPTITEANTQYYQQEASKLRRQIRD
Sb031546_Sorbi1 IVFSSRGRLYEYANNSVKATIERYKKVHTVGSSSGPPLLEHNAQQFYQQESAKLRNQIQM
Sb009126_Sorbi1 VIFSSRGRLYEYSSNSVRSTIERYKKA-SASTSGTAPVIDVNSLQFFQQETAKLRQQIQT
                ::**:*******:.***:.*******  : . :  .* :     *::***::***.**: 

AT2G42830.1     IQNLNRHILGESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQND
Sb031546_Sorbi1 LQNTNRHLVGDSVGNLTLKELKQLESRLEKGISKVRARKNELLAAEINYMAKRETELQND
Sb009126_Sorbi1 LQNSNRHLMGESIGNMTAKELKGLENRLERGIGRIRSKKNELLLAEIEYMQKREADLHNE
                :** ***::*:*:*.:. **** **.***:**.::*::*:*:* ***:** *** :*:*:

AT2G42830.1     NMYLRSKITER-TGLQQQ---ESSVIHQGTVYESGVT-----------------------
Sb031546_Sorbi1 HMNLRTKIEE---GEQQL---QQVTVARSVAAAAAATNVELNPFLEMDTKCFFPGGPFAT
Sb009126_Sorbi1 NMFLRAKVAEVERALQQEAAAEDQTMAMGPAAVGGAT-TELKA---------LPAS----
                :* **:*: *   . **    :. .:  . .  ...*                       

AT2G42830.1     ------------------SSHQ----SGQYNRNYIAVNLLEPNQNSSNQDQPPLQLV---
Sb031546_Sorbi1 LDMKCFFPGGYQMLEATAAQHRQ-MLTTELNLGY---QLALPNSDAANNN--PHQF----
Sb009126_Sorbi1 -----FDPRGYGYYQQQQQQHVLAAASAASSSQYSE----QPQGQGQQEYEYHHQTALHL
                                   .*     :   .  *       *: :. ::     *     

AT2G42830.1     ----------------
Sb031546_Sorbi1 ----------------
Sb009126_Sorbi1 GYHVKIHSAAGGKGFL
BoxShade v3.31 C (beta, 970507) Output
AT2G42830.1     M E G G A S N E V A E S S K K I G R G K I E I K R I E N T T N R Q V T F C K R R N G L L K K A Y E L S V L C D A E V A L
Sb031546_Sorbi1    - - - - - Q R E E Q A A I S S M G R G R I E I K R I E N N T S R Q V T F C K R R N G L L K K A Y E L S V L C D A E V A L
Sb009126_Sorbi1    - - - - - - - - - - - - - - - M G R G K I E I K R I E N T T S R Q V T F C K R R N G L L K K A Y E L S I L C D A E I A L
 
AT2G42830.1     V I F S T R G R L Y E Y A N N S V R G T I E R Y K K - - A C S D A V N P P T I T E A N T Q Y Y Q Q E A S K L R R Q I R D
Sb031546_Sorbi1    I V F S S R G R L Y E Y A N N S V K A T I E R Y K K V H T V G S S S G P P L L E H N A Q Q F Y Q Q E S A K L R N Q I Q M
Sb009126_Sorbi1    V I F S S R G R L Y E Y S S N S V R S T I E R Y K K A - S A S T S G T A P V I D V N S L Q F F Q Q E T A K L R Q Q I Q T
 
AT2G42830.1     I Q N L N R H I L G E S L G S L N F K E L K N L E S R L E K G I S R V R S K K H E M L V A E I E Y M Q K R E I E L Q N D
Sb031546_Sorbi1    L Q N T N R H L V G D S V G N L T L K E L K Q L E S R L E K G I S K V R A R K N E L L A A E I N Y M A K R E T E L Q N D
Sb009126_Sorbi1    L Q N S N R H L M G E S I G N M T A K E L K G L E N R L E R G I G R I R S K K N E L L L A E I E Y M Q K R E A D L H N E
 
AT2G42830.1     N M Y L R S K I T E R - T G L Q Q Q - - - E S S V I H Q G T V Y E S G V T - - - - - - - - - - - - - - - - - - - - - - -
Sb031546_Sorbi1    H M N L R T K I E E - - - G E Q Q L - - - Q Q V T V A R S V A A A A A A T N V E L N P F L E M D T K C F F P G G P F A T
Sb009126_Sorbi1    N M F L R A K V A E V E R A L Q Q E A A A E D Q T M A M G P A A V G G A T - T E L K A - - - - - - - - - L P A S - - - -
 
AT2G42830.1     - - - - - - - - - - - - - - - - - - S S H Q - - - - S G Q Y N R N Y I A V N L L E P N Q N S S N Q D Q P P L Q L V - - -
Sb031546_Sorbi1    L D M K C F F P G G Y Q M L E A T A A Q H R Q - M L T T E L N L G Y - - - Q L A L P N S D A A N N N - - P H Q F - - - -
Sb009126_Sorbi1    - - - - - F D P R G Y G Y Y Q Q Q Q Q Q H V L A A A S A A S S S Q Y S E - - - - Q P Q G Q G Q Q E Y E Y H H Q T A L H L
 
AT2G42830.1     - - - - - - - - - - - - - - - -
Sb031546_Sorbi1    - - - - - - - - - - - - - - - -
Sb009126_Sorbi1    G Y H V K I H S A A G G K G F L
 
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