fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G42830.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm038755 not found in 242aa AT2G42830.1 1st_1st 0.676274944 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.505)


AT2G42830.1     MEGGASNEVAE---SSKKIGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAE
gm038755_Glyma1 ME--FPNEAIPEGCSQKKTGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAE
                **   .**.     *.** *****************************************

AT2G42830.1     VALVIFSTRGRLYEYANNSVRGTIERYKKACSDAVNPPTITEANTQYYQQEASKLRRQIR
gm038755_Glyma1 VALVVFSSRGRLYEYANNSVRGTIDRYKKACAASTNPESVSEANTQFYQQEASKLKRQIR
                ****:**:****************:******: :.** :::*****:********:****

AT2G42830.1     DIQNLNRHILGESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQN
gm038755_Glyma1 DIQNLNRHILGEALSSLSLKELKNLESRLEKGLSRVRSRKHETLFADIEFMQKREIELQN
                ************:*.**.:*************:*****:*** *.*:**:**********

AT2G42830.1     DNMYLRSKITERTGLQQQESSVIHQGTVYESGVTSSHQSGQYNRNYIAVNLLEPNQNSSN
gm038755_Glyma1 HNNFLRAKIAEHEKAQQRQQDMI-PGNVCES--TIPPQS--YDRNFFPVNLIDSNNQYSN
                .* :**:**:*:   **::..:*  *.* **  * . **  *:**::.***::.*:: **

AT2G42830.1     QDQPPLQLV
gm038755_Glyma1 QDQTALQLV
                ***..****
BoxShade v3.31 C (beta, 970507) Output
AT2G42830.1     M E G G A S N E V A E - - - S S K K I G R G K I E I K R I E N T T N R Q V T F C K R R N G L L K K A Y E L S V L C D A E
gm038755_Glyma1    M E - - F P N E A I P E G C S Q K K T G R G K I E I K R I E N T T N R Q V T F C K R R N G L L K K A Y E L S V L C D A E
 
AT2G42830.1     V A L V I F S T R G R L Y E Y A N N S V R G T I E R Y K K A C S D A V N P P T I T E A N T Q Y Y Q Q E A S K L R R Q I R
gm038755_Glyma1    V A L V V F S S R G R L Y E Y A N N S V R G T I D R Y K K A C A A S T N P E S V S E A N T Q F Y Q Q E A S K L K R Q I R
 
AT2G42830.1     D I Q N L N R H I L G E S L G S L N F K E L K N L E S R L E K G I S R V R S K K H E M L V A E I E Y M Q K R E I E L Q N
gm038755_Glyma1    D I Q N L N R H I L G E A L S S L S L K E L K N L E S R L E K G L S R V R S R K H E T L F A D I E F M Q K R E I E L Q N
 
AT2G42830.1     D N M Y L R S K I T E R T G L Q Q Q E S S V I H Q G T V Y E S G V T S S H Q S G Q Y N R N Y I A V N L L E P N Q N S S N
gm038755_Glyma1    H N N F L R A K I A E H E K A Q Q R Q Q D M I - P G N V C E S - - T I P P Q S - - Y D R N F F P V N L I D S N N Q Y S N
 
AT2G42830.1     Q D Q P P L Q L V
gm038755_Glyma1    Q D Q T A L Q L V
 
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