fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G11090.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm039067 not found in 182aa AT3G11090.1 1st_1st 0.577039274 Ia
Pt033414 not found in 182aa AT3G11090.1 1st_1st 0.561933534 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G11090.1     -------------------MRGHEPRSSSSCAACKLLKRRCTPTCIFAPYFRSSDLITFA
pt033414_POPTR_ MSRRQEEVKDIIEVDVISSMRNHEPRASSSCAACKFLKRRCTPNCIFAPYFRSDEPKKFA
gm039067_Glyma1 -------------------MKGYEPRSSSSCAACKFLKRRCIPNCIFAPYFRSDECKKFA
                                   *:.:***:********:***** *.*********.:  .**

AT3G11090.1     KVHKVFGASNVSKLLGEVPEEQRQETVNSLAYEAEVRLKDPVYGCIGAIASLQKKMLELQ
pt033414_POPTR_ KVHKVFGASNVSKILIEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMVELQ
gm039067_Glyma1 KVHKVFGASNVSKILVEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMVELQ
                *************:* *******::**********.**:*********** **:**:***

AT3G11090.1     HDLAVARTRLLAHSGVNNSQVSPLDDSPEL--------AAFLDLVPYSDLMLLDGSTNLD
pt033414_POPTR_ VDLAIARARLARYAA----------NSPPLLNDHGSMIPTFAEFPACGGLV--DSFSQNS
gm039067_Glyma1 HDLAIAKDRLARYTAAATTATATTTTSDALINGHVSL-PPFPDFFTCADNFNNDNFCHTS
                 ***:*: **  ::.           *  *        ..* :: . .. .  *.  : .

AT3G11090.1     A---------YLYDLGQPPFV-
pt033414_POPTR_ S--------DTMNDFSQFPYIF
gm039067_Glyma1 SSQSSFTRHETVDDFIQIPYIF
                :          : *: * *::
BoxShade v3.31 C (beta, 970507) Output
AT3G11090.1     - - - - - - - - - - - - - - - - - - - M R G H E P R S S S S C A A C K L L K R R C T P T C I F A P Y F R S S D L I T F A
pt033414_POPTR_    M S R R Q E E V K D I I E V D V I S S M R N H E P R A S S S C A A C K F L K R R C T P N C I F A P Y F R S D E P K K F A
gm039067_Glyma1    - - - - - - - - - - - - - - - - - - - M K G Y E P R S S S S C A A C K F L K R R C I P N C I F A P Y F R S D E C K K F A
 
AT3G11090.1     K V H K V F G A S N V S K L L G E V P E E Q R Q E T V N S L A Y E A E V R L K D P V Y G C I G A I A S L Q K K M L E L Q
pt033414_POPTR_    K V H K V F G A S N V S K I L I E V P E E Q R E D T V N S L A Y E A E A R L R D P V Y G C I G A I A L L Q R K M V E L Q
gm039067_Glyma1    K V H K V F G A S N V S K I L V E V P E E Q R E D T V N S L A Y E A E A R L R D P V Y G C I G A I A L L Q R K M V E L Q
 
AT3G11090.1     H D L A V A R T R L L A H S G V N N S Q V S P L D D S P E L - - - - - - - - A A F L D L V P Y S D L M L L D G S T N L D
pt033414_POPTR_    V D L A I A R A R L A R Y A A - - - - - - - - - - N S P P L L N D H G S M I P T F A E F P A C G G L V - - D S F S Q N S
gm039067_Glyma1    H D L A I A K D R L A R Y T A A A T T A T A T T T T S D A L I N G H V S L - P P F P D F F T C A D N F N N D N F C H T S
 
AT3G11090.1     A - - - - - - - - - Y L Y D L G Q P P F V -
pt033414_POPTR_    S - - - - - - - - D T M N D F S Q F P Y I F
gm039067_Glyma1    S S Q S S F T R H E T V D D F I Q I P Y I F
 
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