fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G11090.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb020619 GAPPPRLRLRLLHLRP in 198/418 AT5G66870.1 1st_not 0.404833836 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G11090.1     ----MRGHEPRSSSSCAACKLLKRRCTPTCIFAPYFRSSDLITFAKVHKVFGASNVSKLL
Sb020619_Sorbi1 ESGGGRGMS-SSNSPCAACKLLRRKCTQGCVFAPYFPPDNPAKFSSVHRIFGASNVSKLL
                     ** .  *.*.*******:*:**  *:***** ..:  .*:.**::**********

AT3G11090.1     GEVPEEQRQETVNSLAYEAEVRLKDPVYGCIGAIASLQKKMLELQHDLAVARTRLLA---
Sb020619_Sorbi1 NELPQAQREDAVNSLAYEAEARLRDPVYGCVSYISVLQLRIKQVREELAAARKELAGYIG
                .*:*: **:::*********.**:******:. *: ** :: :::.:**.**..* .   

AT3G11090.1     ---------------------------------------------------------HSG
Sb020619_Sorbi1 PAAFTPFVATPQYHHHQYAAGGVPLAAAAGMGLAVGVGPQHGHHPHHQQQIMVHQHQHQH
                                                                         *. 

AT3G11090.1     VNNSQVSPLDDSPELAAFLDLVPYSDLML---------LDGSTN--------------LD
Sb020619_Sorbi1 LHHQQMAAAEAQQQLAAAVEVAREQDLMMRQAAVYAHAVPGSSGGGGGGGGATVAVVPPD
                :::.*::. : . :*** :::.  .***:         : **:.               *

AT3G11090.1     AYLYDLG-----QPPFV-------------------------------------------
Sb020619_Sorbi1 AVPYEGGFLFQQQPPPSQAQTAVALTYQMEQSPPPSSSGQSHPEVSQQQNTDGSDEGSGG
                *  *: *     ***                                             

AT3G11090.1     -----
Sb020619_Sorbi1 VVPPA
BoxShade v3.31 C (beta, 970507) Output
AT3G11090.1     - - - - M R G H E P R S S S S C A A C K L L K R R C T P T C I F A P Y F R S S D L I T F A K V H K V F G A S N V S K L L
Sb020619_Sorbi1    E S G G G R G M S - S S N S P C A A C K L L R R K C T Q G C V F A P Y F P P D N P A K F S S V H R I F G A S N V S K L L
 
AT3G11090.1     G E V P E E Q R Q E T V N S L A Y E A E V R L K D P V Y G C I G A I A S L Q K K M L E L Q H D L A V A R T R L L A - - -
Sb020619_Sorbi1    N E L P Q A Q R E D A V N S L A Y E A E A R L R D P V Y G C V S Y I S V L Q L R I K Q V R E E L A A A R K E L A G Y I G
 
AT3G11090.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - H S G
Sb020619_Sorbi1    P A A F T P F V A T P Q Y H H H Q Y A A G G V P L A A A A G M G L A V G V G P Q H G H H P H H Q Q Q I M V H Q H Q H Q H
 
AT3G11090.1     V N N S Q V S P L D D S P E L A A F L D L V P Y S D L M L - - - - - - - - - L D G S T N - - - - - - - - - - - - - - L D
Sb020619_Sorbi1    L H H Q Q M A A A E A Q Q Q L A A A V E V A R E Q D L M M R Q A A V Y A H A V P G S S G G G G G G G G A T V A V V P P D
 
AT3G11090.1     A Y L Y D L G - - - - - Q P P F V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb020619_Sorbi1    A V P Y E G G F L F Q Q Q P P P S Q A Q T A V A L T Y Q M E Q S P P P S S S G Q S H P E V S Q Q Q N T D G S D E G S G G
 
AT3G11090.1     - - - - -
Sb020619_Sorbi1    V V P P A
 
0