fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G11090.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt042646 not found in 163aa AT3G11090.1 not_1st 0.543806646 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.505)


AT3G11090.1     MRGHEPRSSSSCAACKLLKRRCTPTCIFAPYFRSSDLITFAKVHKVFGASNVSKLLGEVP
pt042646_POPTR_ MRNQEPRASSSCAACKFLKRRCTPNCIFAPYFRSDEPKKFARVHKVFGASNVSKILIEVP
                **.:***:********:*******.*********.:  .**:************:* ***

AT3G11090.1     EEQRQETVNSLAYEAEVRLKDPVYGCIGAIASLQKKMLELQHDLAVARTRLLAHSGVNNS
pt042646_POPTR_ EEQREDTVNSLAYEAEARLTDPVYGCIGAIALLQRKMVELQVDLAIARAR-LARYAANSP
                ****::**********.**.*********** **:**:*** ***:**:* **: ..*..

AT3G11090.1     QVSPLDDS----PELAAFLDLVPYSDLMLLDGSTNLDAYLYDLGQPPFV-
pt042646_POPTR_ PI--LNDHGSMIPTLAEF----PACGGLVDSFNQSSSDTMNDFSQFPFIS
                 :  *:*     * ** *    * .. :: . . . .  : *:.* **:
BoxShade v3.31 C (beta, 970507) Output
AT3G11090.1     M R G H E P R S S S S C A A C K L L K R R C T P T C I F A P Y F R S S D L I T F A K V H K V F G A S N V S K L L G E V P
pt042646_POPTR_    M R N Q E P R A S S S C A A C K F L K R R C T P N C I F A P Y F R S D E P K K F A R V H K V F G A S N V S K I L I E V P
 
AT3G11090.1     E E Q R Q E T V N S L A Y E A E V R L K D P V Y G C I G A I A S L Q K K M L E L Q H D L A V A R T R L L A H S G V N N S
pt042646_POPTR_    E E Q R E D T V N S L A Y E A E A R L T D P V Y G C I G A I A L L Q R K M V E L Q V D L A I A R A R - L A R Y A A N S P
 
AT3G11090.1     Q V S P L D D S - - - - P E L A A F L D L V P Y S D L M L L D G S T N L D A Y L Y D L G Q P P F V -
pt042646_POPTR_    P I - - L N D H G S M I P T L A E F - - - - P A C G G L V D S F N Q S S S D T M N D F S Q F P F I S
 
0