fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G11090.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt033414 not found in 182aa AT3G11090.1 1st_1st 0.561933534 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G11090.1     -------------------MRGHEPRSSSSCAACKLLKRRCTPTCIFAPYFRSSDLITFA
pt033414_POPTR_ MSRRQEEVKDIIEVDVISSMRNHEPRASSSCAACKFLKRRCTPNCIFAPYFRSDEPKKFA
                                   **.****:********:*******.*********.:  .**

AT3G11090.1     KVHKVFGASNVSKLLGEVPEEQRQETVNSLAYEAEVRLKDPVYGCIGAIASLQKKMLELQ
pt033414_POPTR_ KVHKVFGASNVSKILIEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMVELQ
                *************:* *******::**********.**:*********** **:**:***

AT3G11090.1     HDLAVARTRLLAHSGVNNSQVSP--LDDS----PELAAFLDLVPYSDLMLLDGSTNLDAY
pt033414_POPTR_ VDLAIARAR-LARYAAN----SPPLLNDHGSMIPTFAEF----PACGGLVDSFSQNSSDT
                 ***:**:* **: ..*    **  *:*     * :* *    * .. :: . * * .  

AT3G11090.1     LYDLGQPPFV-
pt033414_POPTR_ MNDFSQFPYIF
                : *:.* *::
BoxShade v3.31 C (beta, 970507) Output
AT3G11090.1     - - - - - - - - - - - - - - - - - - - M R G H E P R S S S S C A A C K L L K R R C T P T C I F A P Y F R S S D L I T F A
pt033414_POPTR_    M S R R Q E E V K D I I E V D V I S S M R N H E P R A S S S C A A C K F L K R R C T P N C I F A P Y F R S D E P K K F A
 
AT3G11090.1     K V H K V F G A S N V S K L L G E V P E E Q R Q E T V N S L A Y E A E V R L K D P V Y G C I G A I A S L Q K K M L E L Q
pt033414_POPTR_    K V H K V F G A S N V S K I L I E V P E E Q R E D T V N S L A Y E A E A R L R D P V Y G C I G A I A L L Q R K M V E L Q
 
AT3G11090.1     H D L A V A R T R L L A H S G V N N S Q V S P - - L D D S - - - - P E L A A F L D L V P Y S D L M L L D G S T N L D A Y
pt033414_POPTR_    V D L A I A R A R - L A R Y A A N - - - - S P P L L N D H G S M I P T F A E F - - - - P A C G G L V D S F S Q N S S D T
 
AT3G11090.1     L Y D L G Q P P F V -
pt033414_POPTR_    M N D F S Q F P Y I F
 
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