fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G11090.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt033414 not found in 182aa AT3G11090.1 1st_1st 0.561933534 Ia
Pt042646 not found in 163aa AT3G11090.1 not_1st 0.543806646 II
Pt029537 not found in 161aa AT5G63090.4 not_not 0.407854984 III
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.505)


AT3G11090.1     -------------------MRGHEPRSSSSCAACKLLKRRCTPTCIFAPYFRSSDLITFA
pt042646_POPTR_ -------------------MRNQEPRASSSCAACKFLKRRCTPNCIFAPYFRSDEPKKFA
pt033414_POPTR_ MSRRQEEVKDIIEVDVISSMRNHEPRASSSCAACKFLKRRCTPNCIFAPYFRSDEPKKFA
pt029537_POPTR_ --------------------MASSSYSNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFA
                                       .. :.*.*****:*:*:* * ******* ..:  .**

AT3G11090.1     KVHKVFGASNVSKLLGEVPEEQRQETVNSLAYEAEVRLKDPVYGCIGAIASLQKKMLELQ
pt042646_POPTR_ RVHKVFGASNVSKILIEVPEEQREDTVNSLAYEAEARLTDPVYGCIGAIALLQRKMVELQ
pt033414_POPTR_ KVHKVFGASNVSKILIEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMVELQ
pt029537_POPTR_ NVHKIFGASNVSKLLNEVLPHQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQ
                .***:********:* **  .**:::*********.*: ******:***: **::::.**

AT3G11090.1     HDLAVARTRLLAHSGVNNSQVSPLDDS----PELAAFLDLVPYSDLMLLDGSTNLDAYLY
pt042646_POPTR_ VDLAIARAR-LARYAANSPPI--LNDHGSMIPTLAEF----PACGGLVDSFNQSSSDTMN
pt033414_POPTR_ VDLAIARAR-LARYAANSPPL--LNDHGSMIPTFAEF----PACGGLVDSFSQNSSDTMN
pt029537_POPTR_ KELDATNAD-LIRYACNEMPA--AN----------------PQFGRRMGHGGVSYDQSSG
                 :*  :.:  * : . *.      :                *  .  :   . . .    

AT3G11090.1     DLGQPPFV------------
pt042646_POPTR_ DFSQFPFIS-----------
pt033414_POPTR_ DFSQFPYIF-----------
pt029537_POPTR_ IYYPSPWNNDTCGERGDGSI
                     *:
BoxShade v3.31 C (beta, 970507) Output
AT3G11090.1     - - - - - - - - - - - - - - - - - - - M R G H E P R S S S S C A A C K L L K R R C T P T C I F A P Y F R S S D L I T F A
pt042646_POPTR_    - - - - - - - - - - - - - - - - - - - M R N Q E P R A S S S C A A C K F L K R R C T P N C I F A P Y F R S D E P K K F A
pt033414_POPTR_    M S R R Q E E V K D I I E V D V I S S M R N H E P R A S S S C A A C K F L K R R C T P N C I F A P Y F R S D E P K K F A
pt029537_POPTR_    - - - - - - - - - - - - - - - - - - - - M A S S S Y S N S P C A A C K F L R R K C M P D C I F A P Y F P P E E P Q K F A
 
AT3G11090.1     K V H K V F G A S N V S K L L G E V P E E Q R Q E T V N S L A Y E A E V R L K D P V Y G C I G A I A S L Q K K M L E L Q
pt042646_POPTR_    R V H K V F G A S N V S K I L I E V P E E Q R E D T V N S L A Y E A E A R L T D P V Y G C I G A I A L L Q R K M V E L Q
pt033414_POPTR_    K V H K V F G A S N V S K I L I E V P E E Q R E D T V N S L A Y E A E A R L R D P V Y G C I G A I A L L Q R K M V E L Q
pt029537_POPTR_    N V H K I F G A S N V S K L L N E V L P H Q R E D A V N S L A Y E A E A R M K D P V Y G C V G A I S V L Q R Q V I R L Q
 
AT3G11090.1     H D L A V A R T R L L A H S G V N N S Q V S P L D D S - - - - P E L A A F L D L V P Y S D L M L L D G S T N L D A Y L Y
pt042646_POPTR_    V D L A I A R A R - L A R Y A A N S P P I - - L N D H G S M I P T L A E F - - - - P A C G G L V D S F N Q S S S D T M N
pt033414_POPTR_    V D L A I A R A R - L A R Y A A N S P P L - - L N D H G S M I P T F A E F - - - - P A C G G L V D S F S Q N S S D T M N
pt029537_POPTR_    K E L D A T N A D - L I R Y A C N E M P A - - A N - - - - - - - - - - - - - - - - P Q F G R R M G H G G V S Y D Q S S G
 
AT3G11090.1     D L G Q P P F V - - - - - - - - - - - -
pt042646_POPTR_    D F S Q F P F I S - - - - - - - - - - -
pt033414_POPTR_    D F S Q F P Y I F - - - - - - - - - - -
pt029537_POPTR_    I Y Y P S P W N N D T C G E R G D G S I
 
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