fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G11090.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm048484 not found in 179aa AT3G11090.1 not_1st 0.574018126 II
Gm031876 not found in 189aa AT3G11090.1 not_1st 0.564954682 II
Gm005195 not found in 144aa AT3G11090.1 not_1st 0.549848942 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G11090.1     -----MRG-HEPRSSSSCAACKLLKRRCTPTCIFAPYFRSSDLITFAKVHKVFGASNVSK
gm031876_Glyma1 MLVRGMKG-YEPRSSSSCAACKLLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSK
gm005195_Glyma0 -----MKGYYEPRSSSSCAACKFLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSK
gm048484_Glyma1 -----MKG-YEPRSSSSCAACKLLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSK
                     *:* :************:***** *.*********.:  .***************

AT3G11090.1     LLGEVPEEQRQETVNSLAYEAEVRLKDPVYGCIGAIASLQKKMLELQHDLAVARTRLLAH
gm031876_Glyma1 ILIEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMVELQHDLVIAKDRLARC
gm005195_Glyma0 ILVEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMVELQHDLAIAKDRLARY
gm048484_Glyma1 ILIEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMVELQHDLAIAKDRLARC
                :* *******::**********.**:*********** **:**:******.:*: **   

AT3G11090.1     SGVNNSQ-----VSPLDDSPELAAFLDLVPYSDLMLLDGSTN-----------------L
gm031876_Glyma1 HAAATAAATTTTTTSIPSPDILHANVSLPPFPDFYTSSSDFNDIFCHSSSSQLLSRHETV
gm005195_Glyma0 ATAAATA------TTTPSNSTSH---------DAFFNAHDFH------------GR----
gm048484_Glyma1 HAAAAAA-----TTTIPSPDILHANVSLPPFPDFCTSSSDFNDIFCHSSSSQLLGRHETV
                  .  :       :.  .              *      . :                  

AT3G11090.1     DAYLYDLGQPPFV-
gm031876_Glyma1 D----DFNQIPYIF
gm005195_Glyma0 --------------
gm048484_Glyma1 D----DFNQIPYIF
BoxShade v3.31 C (beta, 970507) Output
AT3G11090.1     - - - - - M R G - H E P R S S S S C A A C K L L K R R C T P T C I F A P Y F R S S D L I T F A K V H K V F G A S N V S K
gm031876_Glyma1    M L V R G M K G - Y E P R S S S S C A A C K L L K R R C I P N C I F A P Y F R S D E C K K F A K V H K V F G A S N V S K
gm005195_Glyma0    - - - - - M K G Y Y E P R S S S S C A A C K F L K R R C I P N C I F A P Y F R S D E C K K F A K V H K V F G A S N V S K
gm048484_Glyma1    - - - - - M K G - Y E P R S S S S C A A C K L L K R R C I P N C I F A P Y F R S D E C K K F A K V H K V F G A S N V S K
 
AT3G11090.1     L L G E V P E E Q R Q E T V N S L A Y E A E V R L K D P V Y G C I G A I A S L Q K K M L E L Q H D L A V A R T R L L A H
gm031876_Glyma1    I L I E V P E E Q R E D T V N S L A Y E A E A R L R D P V Y G C I G A I A L L Q R K M V E L Q H D L V I A K D R L A R C
gm005195_Glyma0    I L V E V P E E Q R E D T V N S L A Y E A E A R L R D P V Y G C I G A I A L L Q R K M V E L Q H D L A I A K D R L A R Y
gm048484_Glyma1    I L I E V P E E Q R E D T V N S L A Y E A E A R L R D P V Y G C I G A I A L L Q R K M V E L Q H D L A I A K D R L A R C
 
AT3G11090.1     S G V N N S Q - - - - - V S P L D D S P E L A A F L D L V P Y S D L M L L D G S T N - - - - - - - - - - - - - - - - - L
gm031876_Glyma1    H A A A T A A A T T T T T T S I P S P D I L H A N V S L P P F P D F Y T S S S D F N D I F C H S S S S Q L L S R H E T V
gm005195_Glyma0    A T A A A T A - - - - - - T T T P S N S T S H - - - - - - - - - D A F F N A H D F H - - - - - - - - - - - - G R - - - -
gm048484_Glyma1    H A A A A A A - - - - - T T T I P S P D I L H A N V S L P P F P D F C T S S S D F N D I F C H S S S S Q L L G R H E T V
 
AT3G11090.1     D A Y L Y D L G Q P P F V -
gm031876_Glyma1    D - - - - D F N Q I P Y I F
gm005195_Glyma0    - - - - - - - - - - - - - -
gm048484_Glyma1    D - - - - D F N Q I P Y I F
 
0