fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G11090.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm050795 not found in 131aa AT3G27650.1 not_not 0.425981873 III
Gm048472 not found in 165aa AT2G30130.1 not_not 0.413897280 III
Gm043189 not found in 178aa AT1G31320.1 not_not 0.407854984 III
Gm051367 not found in 166aa AT3G27650.1 not_not 0.407854984 III
Gm051368 not found in 150aa AT3G27650.1 not_not 0.407854984 III
Gm044124 not found in 144aa AT3G27650.1 not_not 0.407854984 III
Gm046469 not found in 189aa AT5G63090.4 not_not 0.404833836 III
Gm005177 not found in 154aa AT2G30130.1 not_not 0.404833836 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G11090.1     ----------------MRGH--EPRSSSSCAACKLLKRRCTPTCIFAPYFRSSDLITFAK
gm050795_Glyma1 ----------------MASS---SYSNSPCAACKFLRRKCMPDCIFAPYFPPEEPHKFAN
gm048472_Glyma1 -----------------------MAGNSPCASCKLLRRRCTKDCIFAPYFPSNDPQKFAL
gm046469_Glyma1 ----------------MASS---SSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFAN
gm005177_Glyma0 -----------------------MGGNSPCASCKLLRRRCTKDCIFAPYFPSDDPQKFAI
gm051367_Glyma1 MLLPKKEVAGCVLEKIMASS---SYSNSPCAACKFLRRKCMPDCIFSPYFPPEEPQKFAN
gm051368_Glyma1 ----------------MASS---SYSNSPCAACKFLRRKCMPDCIFSPYFPPEEPQKFAN
gm043189_Glyma1 ----------------MKESGRKQGTMSPCAACKLLRRRCTPDCAFAPYFPADEPQKFDS
gm044124_Glyma1 ----------------MASS---SYSNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFAN
                                           *.**:**:*:*:*   * *:*** ..:  .*  

AT3G11090.1     VHKVFGASNVSKLLGEVPEEQRQETVNSLAYEAEVRLKDPVYGCIGAIASLQKKMLELQH
gm050795_Glyma1 VHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQKQVLRLQK
gm048472_Glyma1 VHKVFGASNVSKMLQELPAHQRGDAVSSLVYEAHARVRDPVYGCVGAISHLQNQVSELQM
gm046469_Glyma1 VHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQK
gm005177_Glyma0 VHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSELQM
gm051367_Glyma1 VHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVIRLQK
gm051368_Glyma1 VHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVIRLQK
gm043189_Glyma1 VHKVFGASNVNKMLKELPEHQRSDAVSSMVYEAKARVRDPVYGCVGAISSLQQQVDVLQT
gm044124_Glyma1 VHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVIRLQK
                ***:******.*:* *:  .** ::*.*:.***..*::******:***: **.::  ** 

AT3G11090.1     DLAVARTRLLAHSGVNNSQ--------VSPLDDSP-----------------------EL
gm050795_Glyma1 ELDATNADLIRYS----------------ACNEMPNL-GGRSRIGDI-------------
gm048472_Glyma1 QLAVAQAEILCIQM-----------------QQEP-LMP---NPEMEDPDQKSYLLQNEL
gm046469_Glyma1 ELDAANADLLRYSYTDITPASLSVPPGLASFHHVPQRQFSARFGNELA--SGFYRHQSTT
gm005177_Glyma0 QLAVAQAEILCIQM-----------------EHEP-VMP---AASGIDLDYKSYFLQNDL
gm051367_Glyma1 ELDATNADLIRYT-----------------CNEMPTTQDGRRIIGEGDGDGGSSLGQSPE
gm051368_Glyma1 ELDATNADLIRYT-----------------CNEMPTTQDGRRIIGEGDGDGGSSLGQSPE
gm043189_Glyma1 QLALAQAEVVHMRMRQFSP--------LSDQQQQPSVLPEASNASSENLYHSSRLLSSQT
gm044124_Glyma1 ELDATSADLIR---------------------------------------GGSSLGQS--
                :*  : : ::                                                  

AT3G11090.1     AAFLDL---VPY---SDLMLLDG-------STNLDAYLYDLGQPPFV
gm050795_Glyma1 -----------------------------------------------
gm048472_Glyma1 PQYLNY-------ASSSNVIYDSFSRESIFGHDMVS-----------
gm046469_Glyma1 ATAYSFPYALPWTDTSSEDISEGAGG----GGNL-------------
gm005177_Glyma0 SQFLGF-------DTSSNVM-QQFCP---------------------
gm051367_Glyma1 VTIY----------------------------NI-------------
gm051368_Glyma1 VTIY----------------------------NI-------------
gm043189_Glyma1 KSLF-----------SMDMVVDQANM----GQSLWSY----------
gm044124_Glyma1 -SGYYYPS--PWNN---DTLGDGYHR----GDNI-------------
BoxShade v3.31 C (beta, 970507) Output
AT3G11090.1     - - - - - - - - - - - - - - - - M R G H - - E P R S S S S C A A C K L L K R R C T P T C I F A P Y F R S S D L I T F A K
gm050795_Glyma1    - - - - - - - - - - - - - - - - M A S S - - - S Y S N S P C A A C K F L R R K C M P D C I F A P Y F P P E E P H K F A N
gm048472_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - M A G N S P C A S C K L L R R R C T K D C I F A P Y F P S N D P Q K F A L
gm046469_Glyma1    - - - - - - - - - - - - - - - - M A S S - - - S S Y N S P C A A C K F L R R K C M P G C I F A P Y F P P E E P Q K F A N
gm005177_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - M G G N S P C A S C K L L R R R C T K D C I F A P Y F P S D D P Q K F A I
gm051367_Glyma1    M L L P K K E V A G C V L E K I M A S S - - - S Y S N S P C A A C K F L R R K C M P D C I F S P Y F P P E E P Q K F A N
gm051368_Glyma1    - - - - - - - - - - - - - - - - M A S S - - - S Y S N S P C A A C K F L R R K C M P D C I F S P Y F P P E E P Q K F A N
gm043189_Glyma1    - - - - - - - - - - - - - - - - M K E S G R K Q G T M S P C A A C K L L R R R C T P D C A F A P Y F P A D E P Q K F D S
gm044124_Glyma1    - - - - - - - - - - - - - - - - M A S S - - - S Y S N S P C A A C K F L R R K C M P D C I F A P Y F P P E E P Q K F A N
 
AT3G11090.1     V H K V F G A S N V S K L L G E V P E E Q R Q E T V N S L A Y E A E V R L K D P V Y G C I G A I A S L Q K K M L E L Q H
gm050795_Glyma1    V H K I F G A S N V S K L L N E V Q P H Q R E D A V N S L A Y E A E A R I K D P V Y G C V G A I S V L Q K Q V L R L Q K
gm048472_Glyma1    V H K V F G A S N V S K M L Q E L P A H Q R G D A V S S L V Y E A H A R V R D P V Y G C V G A I S H L Q N Q V S E L Q M
gm046469_Glyma1    V H K I F G A S N V T K L L N E L L P H Q R E D A V N S L A Y E A E A R V R D P V Y G C V G A I S F L Q R Q V Q R L Q K
gm005177_Glyma0    V H K V F G A S N V S K M L Q E L P V H Q R A D A V S S L V Y E A N A R V R D P V Y G C V G A I S Y L Q N Q V S E L Q M
gm051367_Glyma1    V H K I F G A S N V S K L L N E V Q P H Q R E D A V N S L A Y E A E A R I K D P V Y G C V G A I S V L Q R Q V I R L Q K
gm051368_Glyma1    V H K I F G A S N V S K L L N E V Q P H Q R E D A V N S L A Y E A E A R I K D P V Y G C V G A I S V L Q R Q V I R L Q K
gm043189_Glyma1    V H K V F G A S N V N K M L K E L P E H Q R S D A V S S M V Y E A K A R V R D P V Y G C V G A I S S L Q Q Q V D V L Q T
gm044124_Glyma1    V H K I F G A S N V S K L L N E V Q P H Q R E D A V N S L A Y E A E A R I K D P V Y G C V G A I S V L Q R Q V I R L Q K
 
AT3G11090.1     D L A V A R T R L L A H S G V N N S Q - - - - - - - - V S P L D D S P - - - - - - - - - - - - - - - - - - - - - - - E L
gm050795_Glyma1    E L D A T N A D L I R Y S - - - - - - - - - - - - - - - - A C N E M P N L - G G R S R I G D I - - - - - - - - - - - - -
gm048472_Glyma1    Q L A V A Q A E I L C I Q M - - - - - - - - - - - - - - - - - Q Q E P - L M P - - - N P E M E D P D Q K S Y L L Q N E L
gm046469_Glyma1    E L D A A N A D L L R Y S Y T D I T P A S L S V P P G L A S F H H V P Q R Q F S A R F G N E L A - - S G F Y R H Q S T T
gm005177_Glyma0    Q L A V A Q A E I L C I Q M - - - - - - - - - - - - - - - - - E H E P - V M P - - - A A S G I D L D Y K S Y F L Q N D L
gm051367_Glyma1    E L D A T N A D L I R Y T - - - - - - - - - - - - - - - - - C N E M P T T Q D G R R I I G E G D G D G G S S L G Q S P E
gm051368_Glyma1    E L D A T N A D L I R Y T - - - - - - - - - - - - - - - - - C N E M P T T Q D G R R I I G E G D G D G G S S L G Q S P E
gm043189_Glyma1    Q L A L A Q A E V V H M R M R Q F S P - - - - - - - - L S D Q Q Q Q P S V L P E A S N A S S E N L Y H S S R L L S S Q T
gm044124_Glyma1    E L D A T S A D L I R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G G S S L G Q S - -
 
AT3G11090.1     A A F L D L - - - V P Y - - - S D L M L L D G - - - - - - - S T N L D A Y L Y D L G Q P P F V
gm050795_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm048472_Glyma1    P Q Y L N Y - - - - - - - A S S S N V I Y D S F S R E S I F G H D M V S - - - - - - - - - - -
gm046469_Glyma1    A T A Y S F P Y A L P W T D T S S E D I S E G A G G - - - - G G N L - - - - - - - - - - - - -
gm005177_Glyma0    S Q F L G F - - - - - - - D T S S N V M - Q Q F C P - - - - - - - - - - - - - - - - - - - - -
gm051367_Glyma1    V T I Y - - - - - - - - - - - - - - - - - - - - - - - - - - - - N I - - - - - - - - - - - - -
gm051368_Glyma1    V T I Y - - - - - - - - - - - - - - - - - - - - - - - - - - - - N I - - - - - - - - - - - - -
gm043189_Glyma1    K S L F - - - - - - - - - - - S M D M V V D Q A N M - - - - G Q S L W S Y - - - - - - - - - -
gm044124_Glyma1    - S G Y Y Y P S - - P W N N - - - D T L G D G Y H R - - - - G D N I - - - - - - - - - - - - -
 
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