fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G11090.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm039067 not found in 182aa AT3G11090.1 1st_1st 0.577039274 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.505)


AT3G11090.1     MRGHEPRSSSSCAACKLLKRRCTPTCIFAPYFRSSDLITFAKVHKVFGASNVSKLLGEVP
gm039067_Glyma1 MKGYEPRSSSSCAACKFLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILVEVP
                *:*:************:***** *.*********.:  .***************:* ***

AT3G11090.1     EEQRQETVNSLAYEAEVRLKDPVYGCIGAIASLQKKMLELQHDLAVARTRLLAHSGVNNS
gm039067_Glyma1 EEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMVELQHDLAIAKDRLARYTAAATT
                ****::**********.**:*********** **:**:*******:*: **  ::.. .:

AT3G11090.1     QVSPLDDSPELA-AFLDLVPYSDLMLLDGSTNLDAYLY---------------DLGQPPF
gm039067_Glyma1 ATATTTTSDALINGHVSLPPFPDFFTCADNFNNDNFCHTSSSQSSFTRHETVDDFIQIPY
                 .:.   *  *  ..:.* *:.*::   .. * * : :               *: * *:

AT3G11090.1     V-
gm039067_Glyma1 IF
                :
BoxShade v3.31 C (beta, 970507) Output
AT3G11090.1     M R G H E P R S S S S C A A C K L L K R R C T P T C I F A P Y F R S S D L I T F A K V H K V F G A S N V S K L L G E V P
gm039067_Glyma1    M K G Y E P R S S S S C A A C K F L K R R C I P N C I F A P Y F R S D E C K K F A K V H K V F G A S N V S K I L V E V P
 
AT3G11090.1     E E Q R Q E T V N S L A Y E A E V R L K D P V Y G C I G A I A S L Q K K M L E L Q H D L A V A R T R L L A H S G V N N S
gm039067_Glyma1    E E Q R E D T V N S L A Y E A E A R L R D P V Y G C I G A I A L L Q R K M V E L Q H D L A I A K D R L A R Y T A A A T T
 
AT3G11090.1     Q V S P L D D S P E L A - A F L D L V P Y S D L M L L D G S T N L D A Y L Y - - - - - - - - - - - - - - - D L G Q P P F
gm039067_Glyma1    A T A T T T T S D A L I N G H V S L P P F P D F F T C A D N F N N D N F C H T S S S Q S S F T R H E T V D D F I Q I P Y
 
AT3G11090.1     V -
gm039067_Glyma1    I F
 
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