fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G42790.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os029000 not found in 278aa AT5G26210.1 1st_not 0.730582524 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G42790.1     MEGGAALYNPRTVEEVFKDFKGRRTAIVKALTTDVQEFYQQCDPEKENLCLYGLPNEEWE
Os029000_Os07t0 MD---AQYNPRTVEEVFRDFKGRRAGLVRALTADVEDFFRQCDPEKENLCLYGFPNEHWE
                *:   * **********:******:.:*:***:**::*::*************:***.**

AT3G42790.1     VNLPAEEVPPELPEPALGINFARDGLSEKEWLSLVAIHSDAWLLSVSFYFGSRFSFHKEE
Os029000_Os07t0 VNLPAEEVPPELPEPALGINFARDGMQEKDWLSMVAVHSDAWLLSVAFYFGARFGFDKND
                *************************:.**:***:**:*********:****:**.*.*::

AT3G42790.1     RKRLFNMINDVPTIFEVVTGMAKAKDKSSAANQNGNKSKSNSKVRTSEGKSSKTKQPKEE
Os029000_Os07t0 RKRLFGMINDLPTIFEVVSGKSKAK-PPSANNHSNSKSKSSNKTKSSE---PRAKQPKPQ
                *****.****:*******:* :***  .** *:...****..*.::**   .::**** :

AT3G42790.1     ----------DEEIDEDD------------EDDHGETLCGACGDSDGADEFWICCDLCEK
Os029000_Os07t0 PQPPVKNEGREEEGGPDDEEGGGGGGGGGREEEHGETLCGACGESYGADEFWICCDICEK
                          :** . **            *::**********:* **********:***

AT3G42790.1     WFHGKCVKITPARAEHIKQYKCPSCS------------NKRARA-
Os029000_Os07t0 WFHGKCVKITPAKAEHIKQYKCPSCSGGNGGGGGVSGNGKRARPS
                ************:*************            .****.
BoxShade v3.31 C (beta, 970507) Output
AT3G42790.1     M E G G A A L Y N P R T V E E V F K D F K G R R T A I V K A L T T D V Q E F Y Q Q C D P E K E N L C L Y G L P N E E W E
Os029000_Os07t0    M D - - - A Q Y N P R T V E E V F R D F K G R R A G L V R A L T A D V E D F F R Q C D P E K E N L C L Y G F P N E H W E
 
AT3G42790.1     V N L P A E E V P P E L P E P A L G I N F A R D G L S E K E W L S L V A I H S D A W L L S V S F Y F G S R F S F H K E E
Os029000_Os07t0    V N L P A E E V P P E L P E P A L G I N F A R D G M Q E K D W L S M V A V H S D A W L L S V A F Y F G A R F G F D K N D
 
AT3G42790.1     R K R L F N M I N D V P T I F E V V T G M A K A K D K S S A A N Q N G N K S K S N S K V R T S E G K S S K T K Q P K E E
Os029000_Os07t0    R K R L F G M I N D L P T I F E V V S G K S K A K - P P S A N N H S N S K S K S S N K T K S S E - - - P R A K Q P K P Q
 
AT3G42790.1     - - - - - - - - - - D E E I D E D D - - - - - - - - - - - - E D D H G E T L C G A C G D S D G A D E F W I C C D L C E K
Os029000_Os07t0    P Q P P V K N E G R E E E G G P D D E E G G G G G G G G G R E E E H G E T L C G A C G E S Y G A D E F W I C C D I C E K
 
AT3G42790.1     W F H G K C V K I T P A R A E H I K Q Y K C P S C S - - - - - - - - - - - - N K R A R A -
Os029000_Os07t0    W F H G K C V K I T P A K A E H I K Q Y K C P S C S G G N G G G G G V S G N G K R A R P S
 
0