fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G42790.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb032609 not found in 354aa AT5G26210.1 1st_not 0.711165048 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G42790.1     MEGGA-ALYNPRTVEEVFKDFKGRRTAIVKALTTDVQEFYQQCDPEKENLCLYGLPNEEW
Sb032609_Sorbi1 MDPGAGAHYSARTAEEVFRDFRGRRAGMIKALTNDVEKFYQLCDPEKENLCLYGYPNETW
                *: ** * *..**.****:**:***:.::****.**::*** ************ *** *

AT3G42790.1     EVNLPAEEVPPELPEPALGINFARDGLSEKEWLSLVAIHSDAWLLSVSFYFGSRFSFHKE
Sb032609_Sorbi1 EVTLPAEEVPPEIPEPALGINFARDGMNEKDWLALVAVHSDSWLLAVAFYFAARFGFDKE
                **.*********:*************:.**:**:***:***:***:*:***.:**.*.**

AT3G42790.1     ERKRLFNMINDVPTIFEVVTGMAKAKDKSSAANQNGNKSKSNSKVRT---SEGKSSKTKQ
Sb032609_Sorbi1 ARRRLFNMINNLPTIFEVVTGVAKKQNKEKGPNSTSKSNKPSSKMTSRPESHSKATKVAA
                 *:*******::*********:** ::*....*...:..*..**: :   *..*::*.  

AT3G42790.1     PKEED-----EEIDEDDEDDHGETLCGACGDSDGADEFWICCDLCEKWFHGKCVKITPAR
Sb032609_Sorbi1 PPKDDDDESGEEYEEEEERDN--TLCGSCGTNDGKDEFWICCDSCERWYHGKCVKITPAR
                * ::*     ** :*::* *:  ****:** .** ******** **:*:***********

AT3G42790.1     AEHIKQYKCPSCSNKRARA
Sb032609_Sorbi1 AEHIKHYKCPDCSNKRARA
                *****:****.********
BoxShade v3.31 C (beta, 970507) Output
AT3G42790.1     M E G G A - A L Y N P R T V E E V F K D F K G R R T A I V K A L T T D V Q E F Y Q Q C D P E K E N L C L Y G L P N E E W
Sb032609_Sorbi1    M D P G A G A H Y S A R T A E E V F R D F R G R R A G M I K A L T N D V E K F Y Q L C D P E K E N L C L Y G Y P N E T W
 
AT3G42790.1     E V N L P A E E V P P E L P E P A L G I N F A R D G L S E K E W L S L V A I H S D A W L L S V S F Y F G S R F S F H K E
Sb032609_Sorbi1    E V T L P A E E V P P E I P E P A L G I N F A R D G M N E K D W L A L V A V H S D S W L L A V A F Y F A A R F G F D K E
 
AT3G42790.1     E R K R L F N M I N D V P T I F E V V T G M A K A K D K S S A A N Q N G N K S K S N S K V R T - - - S E G K S S K T K Q
Sb032609_Sorbi1    A R R R L F N M I N N L P T I F E V V T G V A K K Q N K E K G P N S T S K S N K P S S K M T S R P E S H S K A T K V A A
 
AT3G42790.1     P K E E D - - - - - E E I D E D D E D D H G E T L C G A C G D S D G A D E F W I C C D L C E K W F H G K C V K I T P A R
Sb032609_Sorbi1    P P K D D D D E S G E E Y E E E E E R D N - - T L C G S C G T N D G K D E F W I C C D S C E R W Y H G K C V K I T P A R
 
AT3G42790.1     A E H I K Q Y K C P S C S N K R A R A
Sb032609_Sorbi1    A E H I K H Y K C P D C S N K R A R A
 
0