fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G54340.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm008702 not found in 227aa AT3G54340.1 1st_1st 0.567164179 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.505)


AT3G54340.1     MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISP
gm008702_Glyma0 MARGKIQIKRIENNTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHQYISP
                *************:******************:********:********:.***:****

AT3G54340.1     NTTTKEIVDLYQTISDVDVWATQYERMQETKRKLLETNRNLRTQIKQRLGECLDELDIQE
gm008702_Glyma0 STSTKQFFDQYQMTLGVDLWNSHYENMQENLKKLKEVNRNLRKEIRQRMGDCLNELGMED
                .*:**::.* **   .**:* ::**.***. :** *.*****.:*:**:*:**:**.:::

AT3G54340.1     LRRLEDEMENTFKLVRERKFKSLGNQIETTKKKNKSQQDIQKNLIHELELRAEDPHYGLV
gm008702_Glyma0 LKLLEEEMDKAAKVVRERKYKVITNQIDTQRKKFNNEKEVHNRLLHDLDAKAEDPRFALI
                *: **:**::: *:*****:* : ***:* :** :.::::::.*:*:*: :****::.*:

AT3G54340.1     DNGGDYDSVLGYQIEGSRAYALRFHQNHHHYYPNHGLHAPSA------SDIITFHLLE
gm008702_Glyma0 DNGGEYESVIGFSNLGPRMFALSIQPSH-----------PSAHSGGAGSDLTTYPLLF
                ****:*:**:*:.  *.* :** :: .*           ***      **: *: **
BoxShade v3.31 C (beta, 970507) Output
AT3G54340.1     M A R G K I Q I K R I E N Q T N R Q V T Y S K R R N G L F K K A H E L T V L C D A R V S I I M F S S S N K L H E Y I S P
gm008702_Glyma0    M A R G K I Q I K R I E N N T N R Q V T Y S K R R N G L F K K A N E L T V L C D A K V S I I M F S S T G K L H Q Y I S P
 
AT3G54340.1     N T T T K E I V D L Y Q T I S D V D V W A T Q Y E R M Q E T K R K L L E T N R N L R T Q I K Q R L G E C L D E L D I Q E
gm008702_Glyma0    S T S T K Q F F D Q Y Q M T L G V D L W N S H Y E N M Q E N L K K L K E V N R N L R K E I R Q R M G D C L N E L G M E D
 
AT3G54340.1     L R R L E D E M E N T F K L V R E R K F K S L G N Q I E T T K K K N K S Q Q D I Q K N L I H E L E L R A E D P H Y G L V
gm008702_Glyma0    L K L L E E E M D K A A K V V R E R K Y K V I T N Q I D T Q R K K F N N E K E V H N R L L H D L D A K A E D P R F A L I
 
AT3G54340.1     D N G G D Y D S V L G Y Q I E G S R A Y A L R F H Q N H H H Y Y P N H G L H A P S A - - - - - - S D I I T F H L L E
gm008702_Glyma0    D N G G E Y E S V I G F S N L G P R M F A L S I Q P S H - - - - - - - - - - - P S A H S G G A G S D L T T Y P L L F
 
0