fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G11060.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os025814 not found in 323aa AT5G25220.1 1st_not 0.566371681 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.505)


AT5G11060.1     MAFHNNHFNHFTDQQQHQPPPPPQQQQQQHFQESAPPNWLLRSDNNFLNLHTAASAAATS
Os025814_Os06t0 MAF--------------------------HYQDHA------------LAMDAAAAAAETG
                ***                          *:*: *            * :.:**:** *.

AT5G11060.1     S-DSPSSAAANQWLSRSSSFLQRGNTANNNNNETSGDVIEDVPGGEESMIGEKKEAERWQ
Os025814_Os06t0 GHHHPGFVGA-------------------------GGVVGGGGGGG------------WE
                . . *. ..*                         *.*: .  **             *:

AT5G11060.1     NARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQN--VVAKYSTLEAAQ
Os025814_Os06t0 --REKAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAATAAAAAAAA
                  *.** * :*****:**.*******:*************:*      ..*. ::  ** 

AT5G11060.1     GLLAGDDKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVSPGE
Os025814_Os06t0 GGAPSGGEELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPRE
                *  ....:*** *********************************:**:***:**.** *

AT5G11060.1     GTGATMSEDEDEQVESDAHLFDGS--LDGLGFGPLVPTESERSLMERVRQELKHELKQGY
Os025814_Os06t0 GSGATMSDDEDNQVDSESNMFDGNDGSDGMGFGPLMLTEGERSLVERVRQELKHELKQGY
                *:*****:***:**:*::::***.   **:*****: **.****:***************

AT5G11060.1     KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQI
Os025814_Os06t0 REKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPTEEDKARLVQETGLQLKQI
                :**:********************:*.**:***:**************************

AT5G11060.1     NNWFINQRKRNWHSNPSSSTVSKNKR-RSNAGENSGRDR-
Os025814_Os06t0 NNWFINQRKRNWHSNPASSSSDKSKRKRSNAGDGKAEQSW
                ****************:**: .*.** *****:....:
BoxShade v3.31 C (beta, 970507) Output
AT5G11060.1     M A F H N N H F N H F T D Q Q Q H Q P P P P P Q Q Q Q Q Q H F Q E S A P P N W L L R S D N N F L N L H T A A S A A A T S
Os025814_Os06t0    M A F - - - - - - - - - - - - - - - - - - - - - - - - - - H Y Q D H A - - - - - - - - - - - - L A M D A A A A A A E T G
 
AT5G11060.1     S - D S P S S A A A N Q W L S R S S S F L Q R G N T A N N N N N E T S G D V I E D V P G G E E S M I G E K K E A E R W Q
Os025814_Os06t0    G H H H P G F V G A - - - - - - - - - - - - - - - - - - - - - - - - - G G V V G G G G G G G - - - - - - - - - - - - W E
 
AT5G11060.1     N A R H K A E I L S H P L Y E Q L L S A H V A C L R I A T P V D Q L P R I D A Q L A Q S Q N - - V V A K Y S T L E A A Q
Os025814_Os06t0    - - R E K A A I A A H P L Y E R L L E A H V A C L R V A T P V D Q L P R I D A Q I A A R P P P L A A A T A A A A A A A A
 
AT5G11060.1     G L L A G D D K E L D H F M T H Y V L L L C S F K E Q L Q Q H V R V H A M E A V M A C W E I E Q S L Q S F T G V S P G E
Os025814_Os06t0    G G A P S G G E E L D L F M T H Y V L L L C S F K E Q L Q Q H V R V H A M E A V M A C W E L E Q T L Q S L T G A S P R E
 
AT5G11060.1     G T G A T M S E D E D E Q V E S D A H L F D G S - - L D G L G F G P L V P T E S E R S L M E R V R Q E L K H E L K Q G Y
Os025814_Os06t0    G S G A T M S D D E D N Q V D S E S N M F D G N D G S D G M G F G P L M L T E G E R S L V E R V R Q E L K H E L K Q G Y
 
AT5G11060.1     K E K I V D I R E E I L R K R R A G K L P G D T T S V L K S W W Q S H S K W P Y P T E E D K A R L V Q E T G L Q L K Q I
Os025814_Os06t0    R E K L V D I R E E I L R K R R A G K L P G D T A S T L K A W W Q A H S K W P Y P T E E D K A R L V Q E T G L Q L K Q I
 
AT5G11060.1     N N W F I N Q R K R N W H S N P S S S T V S K N K R - R S N A G E N S G R D R -
Os025814_Os06t0    N N W F I N Q R K R N W H S N P A S S S S D K S K R K R S N A G D G K A E Q S W
 
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