fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G40350.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm023935 QSEDEMDLRRGPWTVDE in 24/340 AT3G06490.1 not_not 0.460829493 III
Gm042133 QSEDEMDLRRGPWTVDE in 23/341 AT3G06490.1 not_not 0.453917050 III
Gm045910 SCEDEMDLRRGPWTVDE in 19/322 AT3G06490.1 not_not 0.442396313 III
LFPQGLDLQSMDPNTPWN in 282/322
Gm019269 SSEDEMDLRRGPWTVDE in 19/325 AT3G06490.1 not_not 0.442396313 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.505)


AT5G40350.1     MEK---RESSGG------SGSGDAEVRKGPWTMEEDLILINYIANHGEGVWNSLAKSAGL
gm019269_Glyma0 MDGKGARSSN-----TLLSSEDEMDLRRGPWTVDEDLTLINYVATHGEGRWNTLALSAGL
gm042133_Glyma1 MEVKG-RISNSTITTTTIQSEDEMDLRRGPWTVDEDLALINYIANHGEGRWNSLARSAGL
gm023935_Glyma0 MEVKGIRASNSTTTTTTIQSEDEMDLRRGPWTVDEDLALINYIANHGEGRWNSLARSAGL
gm045910_Glyma1 MDEKGARSSN-----TLLSCEDEMDLRRGPWTVDEDLTLINYIATHGEGRWNTLALSAGL
                *:    * *.        . ..: ::*:****::*** ****:*.**** **:** ****

AT5G40350.1     KRTGKSCRLRWLNYLRPDVRRGNITPEEQLTIMELHAKWGNRWSKIAKHLPGRTDNEIKN
gm019269_Glyma0 KRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKN
gm042133_Glyma1 KRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHGRWGNRWSKIAQYLPGRTDNEIKN
gm023935_Glyma0 KRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHGRWGNRWSKIAQYLPGRTDNEIKN
gm045910_Glyma1 KRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKN
                ************************* **** *:***.:*********::***********

AT5G40350.1     FWRTKIQKYIIK----------------------------------------------SG
gm019269_Glyma0 YWRTRVQKHAKQLKCDVNSKQFKDTMRYIWMPRLVERIQATAA---------------AS
gm042133_Glyma1 YWRTRVQKQAKQLKCDVNSKQFKDAMRYLWMPRLVERIQAAAAAATTATATVGSPTASAS
gm023935_Glyma0 YWRTRVQKHAKQLKCDVNSKQFKDAMRYLWMPRLVERIQAAAAATTTVAAA-GSPTASAS
gm045910_Glyma1 YWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAT---------------AP
                :***::**   :                                              : 

AT5G40350.1     ETTTVGSQSSEFINHHATTS-------HVMNDTQET--------------MD--------
gm019269_Glyma0 ATTTVTATT---ATNNAYTY-----GSNLNNNKFEVHDHKGKMGLTDPSVMN-NDLVGSH
gm042133_Glyma1 ATTTITT------NNNATTYNYENNNNNNLNNSFEV--HSGNMMLRNPAIMNINNFVGSH
gm023935_Glyma0 ATTTITT------NNNTTTYNYY--DNNNLNNSFEV--HSGNMMVRNPTIMNNNNFCGSH
gm045910_Glyma1 VTTTVTA-A---ATNNAFTY-----GNNLNNNKFEVLNHKGRMGLTDPSVAN-NDFVGSH
                 ***: :      .::: *        :  *:. *.               :        

AT5G40350.1     ---MY-SPTTSYQHA----------------------------SNINQQLNYGNYVPESG
gm019269_Glyma0 VTQSY-TPENSSTGASSSDSFGTQVSAISDLTE--YYTVTV--SGNNNNTNSADYYQPS-
gm042133_Glyma1 ---SY-TPENNSTGA-SSDSFGAQVSPVSDLTQDYYNNVTVENNNNNNNPNP-EYYQQAH
gm023935_Glyma0 ---SY-TPENSSTGA-SSDSFGTQVSPVSDLTQDYYNNVTA-GNNNNNNPNPDQYYQQAH
gm045910_Glyma1 VTQSYTTPENSSTGASSSDSFGTQVSTISDLTE--YYSVP-------ENTNSADYYQPS-
                    * :* ..   *                                :: *  :*   : 

AT5G40350.1     ---------SIMMPLS------------------------VDQSEQNYWSVDDLWPMNI-
gm019269_Glyma0 -QIS-YSDSCITSPSG-LFPQGLDFQSMDPNTPWNMQS--GDSS-DSFWNVESMLFLEQQ
gm042133_Glyma1 DQLS-FLD-CITSPSG-LF----DFQSMEPNTPWIQ-SNVGDTSTNGFWNVENMLLFQQ-
gm023935_Glyma0 DQLS-FLD-CITSPSG-LF----DFQPMEPNTPWINLSNVGDTS-NGFWNVENMLLFQQ-
gm045910_Glyma1 -QISNYSDNCITSPSGFLFPQGLDLQSMDPNTPWNMQS--GDSS-DNFWDVESMLFLEQQ
                         .*  * .                         * * :.:*.*:.:  ::  

AT5G40350.1     -YNGN--
gm019269_Glyma0 LMNDNM-
gm042133_Glyma1 -LSDNM-
gm023935_Glyma0 -FSDNNM
gm045910_Glyma1 LMNDNM-
                  ..*
BoxShade v3.31 C (beta, 970507) Output
AT5G40350.1     M E K - - - R E S S G G - - - - - - S G S G D A E V R K G P W T M E E D L I L I N Y I A N H G E G V W N S L A K S A G L
gm019269_Glyma0    M D G K G A R S S N - - - - - T L L S S E D E M D L R R G P W T V D E D L T L I N Y V A T H G E G R W N T L A L S A G L
gm042133_Glyma1    M E V K G - R I S N S T I T T T T I Q S E D E M D L R R G P W T V D E D L A L I N Y I A N H G E G R W N S L A R S A G L
gm023935_Glyma0    M E V K G I R A S N S T T T T T T I Q S E D E M D L R R G P W T V D E D L A L I N Y I A N H G E G R W N S L A R S A G L
gm045910_Glyma1    M D E K G A R S S N - - - - - T L L S C E D E M D L R R G P W T V D E D L T L I N Y I A T H G E G R W N T L A L S A G L
 
AT5G40350.1     K R T G K S C R L R W L N Y L R P D V R R G N I T P E E Q L T I M E L H A K W G N R W S K I A K H L P G R T D N E I K N
gm019269_Glyma0    K R T G K S C R L R W L N Y L R P D V R R G N I T L E E Q L L I L E L H S R W G N R W S K I A Q Y L P G R T D N E I K N
gm042133_Glyma1    K R T G K S C R L R W L N Y L R P D V R R G N I T L E E Q L L I L E L H G R W G N R W S K I A Q Y L P G R T D N E I K N
gm023935_Glyma0    K R T G K S C R L R W L N Y L R P D V R R G N I T L E E Q L L I L E L H G R W G N R W S K I A Q Y L P G R T D N E I K N
gm045910_Glyma1    K R T G K S C R L R W L N Y L R P D V R R G N I T L E E Q L L I L E L H S R W G N R W S K I A Q Y L P G R T D N E I K N
 
AT5G40350.1     F W R T K I Q K Y I I K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S G
gm019269_Glyma0    Y W R T R V Q K H A K Q L K C D V N S K Q F K D T M R Y I W M P R L V E R I Q A T A A - - - - - - - - - - - - - - - A S
gm042133_Glyma1    Y W R T R V Q K Q A K Q L K C D V N S K Q F K D A M R Y L W M P R L V E R I Q A A A A A A T T A T A T V G S P T A S A S
gm023935_Glyma0    Y W R T R V Q K H A K Q L K C D V N S K Q F K D A M R Y L W M P R L V E R I Q A A A A A T T T V A A A - G S P T A S A S
gm045910_Glyma1    Y W R T R V Q K H A K Q L K C D V N S K Q F K D T M R Y L W M P R L V E R I Q A A A T - - - - - - - - - - - - - - - A P
 
AT5G40350.1     E T T T V G S Q S S E F I N H H A T T S - - - - - - - H V M N D T Q E T - - - - - - - - - - - - - - M D - - - - - - - -
gm019269_Glyma0    A T T T V T A T T - - - A T N N A Y T Y - - - - - G S N L N N N K F E V H D H K G K M G L T D P S V M N - N D L V G S H
gm042133_Glyma1    A T T T I T T - - - - - - N N N A T T Y N Y E N N N N N N L N N S F E V - - H S G N M M L R N P A I M N I N N F V G S H
gm023935_Glyma0    A T T T I T T - - - - - - N N N T T T Y N Y Y - - D N N N L N N S F E V - - H S G N M M V R N P T I M N N N N F C G S H
gm045910_Glyma1    V T T T V T A - A - - - A T N N A F T Y - - - - - G N N L N N N K F E V L N H K G R M G L T D P S V A N - N D F V G S H
 
AT5G40350.1     - - - M Y - S P T T S Y Q H A - - - - - - - - - - - - - - - - - - - - - - - - - - - - S N I N Q Q L N Y G N Y V P E S G
gm019269_Glyma0    V T Q S Y - T P E N S S T G A S S S D S F G T Q V S A I S D L T E - - Y Y T V T V - - S G N N N N T N S A D Y Y Q P S -
gm042133_Glyma1    - - - S Y - T P E N N S T G A - S S D S F G A Q V S P V S D L T Q D Y Y N N V T V E N N N N N N N P N P - E Y Y Q Q A H
gm023935_Glyma0    - - - S Y - T P E N S S T G A - S S D S F G T Q V S P V S D L T Q D Y Y N N V T A - G N N N N N N P N P D Q Y Y Q Q A H
gm045910_Glyma1    V T Q S Y T T P E N S S T G A S S S D S F G T Q V S T I S D L T E - - Y Y S V P - - - - - - - E N T N S A D Y Y Q P S -
 
AT5G40350.1     - - - - - - - - - S I M M P L S - - - - - - - - - - - - - - - - - - - - - - - - V D Q S E Q N Y W S V D D L W P M N I -
gm019269_Glyma0    - Q I S - Y S D S C I T S P S G - L F P Q G L D F Q S M D P N T P W N M Q S - - G D S S - D S F W N V E S M L F L E Q Q
gm042133_Glyma1    D Q L S - F L D - C I T S P S G - L F - - - - D F Q S M E P N T P W I Q - S N V G D T S T N G F W N V E N M L L F Q Q -
gm023935_Glyma0    D Q L S - F L D - C I T S P S G - L F - - - - D F Q P M E P N T P W I N L S N V G D T S - N G F W N V E N M L L F Q Q -
gm045910_Glyma1    - Q I S N Y S D N C I T S P S G F L F P Q G L D L Q S M D P N T P W N M Q S - - G D S S - D N F W D V E S M L F L E Q Q
 
AT5G40350.1     - Y N G N - -
gm019269_Glyma0    L M N D N M -
gm042133_Glyma1    - L S D N M -
gm023935_Glyma0    - F S D N N M
gm045910_Glyma1    L M N D N M -
 
0