fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G24260 AGL9, SEP3 SEPALLATA3, AGAMOUS-like 9, K-box region and MADS-box transcription factor family protein (.1.2.3)

>AT1G24260.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, NcoI, NdeI, NheI, NotI, PacI, PstI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 354
HindIII A|AGCTT 298, 620
KpnI GGTAC|C 206
PvuII CAG|CTG 550
SacI GAGCT|C 428


Click here to view TAIR data

>AT1G24260.2 length:756
ATGGGAAGAG GGAGAGTAGA ATTGAAGAGG ATAGAGAACA AGATCAATAG 
50
GCAAGTGACG TTTGCAAAGA GAAGGAATGG TCTTTTGAAG AAAGCATACG 
100
AGCTTTCAGT TCTATGTGAT GCAGAAGTTG CTCTCATCAT CTTCTCAAAT 
150
AGAGGAAAGC TGTACGAGTT TTGCAGTAGT TCGAGCATGC TTCGGACACT 
200
GGAGAGGTAC CAAAAGTGTA ACTATGGAGC ACCAGAACCC AATGTGCCTT 
250
CAAGAGAGGC CTTAGCAGTT GAACTTAGTA GCCAGCAGGA GTATCTCAAG 
300
CTTAAGGAGC GTTATGACGC CTTACAGAGA ACCCAAAGGA ATCTGTTGGG 
350
AGAAGATCTT GGACCTCTAA GTACAAAGGA GCTTGAGTCA CTTGAGAGAC 
400
AGCTTGATTC TTCCTTGAAG CAGATCAGAG CTCTCAGGAC ACAGTTTATG 
450
CTTGACCAGC TCAACGATCT TCAGAGTAAG GAACGCATGC TGACTGAGAC 
500
AAATAAAACT CTAAGACTAA GGTTAGCTGA TGGGTATCAG ATGCCACTCC 
550
AGCTGAACCC TAACCAAGAA GAGGTTGATC ACTACGGTCG TCATCATCAT 
600
CAACAACAAC AACACTCCCA AGCTTTCTTC CAGCCTTTGG AATGTGAACC 
650
CATTCTTCAG ATCGGGTATC AGGGGCAACA AGATGGAATG GGAGCAGGAC 
700
CAAGTGTGAA TAATTACATG TTGGGTTGGT TACCTTATGA CACCAACTCT 
750
ATTTGA
800

>AT1G24260.2 longest ORF length:251
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN 
50
RGKLYEFCSS SSMLRTLERY QKCNYGAPEP NVPSREALAV ELSSQQEYLK 
100
LKERYDALQR TQRNLLGEDL GPLSTKELES LERQLDSSLK QIRALRTQFM 
150
LDQLNDLQSK ERMLTETNKT LRLRLADGYQ MPLQLNPNQE EVDHYGRHHH 
200
QQQQHSQAFF QPLECEPILQ IGYQGQQDGM GAGPSVNNYM LGWLPYDTNS 
250
I
300