fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G52150 ATHB15, ICU4, CNA, ATHB-15 INCURVATA 4, CORONA, Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein (.1.2.3)

>AT1G52150.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, HindIII, HpaI, KpnI, NheI, NotI, PacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 865, 1891
EcoRV GAT|ATC 1630
NcoI C|CATGG 1955
NdeI CA|TATG 997, 1933
PstI CTGCA|G 464
PvuII CAG|CTG 325, 1841
SacI GAGCT|C 1175
StyI C|C[AT][AT]GG 1808, 1955


Click here to view TAIR data

>AT1G52150.2 length:2514
ATGGCAATGT CTTGCAAGGA TGGTAAGTTG GGATGTTTGG ATAATGGGAA 
50
GTATGTGAGG TATACACCTG AACAAGTTGA AGCACTTGAG AGGCTTTATC 
100
ATGACTGTCC TAAACCGAGT TCTATTCGCC GTCAGCAGTT GATCAGAGAG 
150
TGTCCTATTC TCTCTAACAT TGAGCCTAAA CAGATCAAAG TGTGGTTTCA 
200
GAACCGAAGA TGTAGAGAGA AACAAAGGAA AGAGGCTTCA CGGCTTCAAG 
250
CTGTGAATCG GAAGTTGACG GCAATGAACA AGCTCTTGAT GGAGGAGAAT 
300
GACAGGTTGC AGAAGCAAGT GTCACAGCTG GTCCATGAAA ACAGCTACTT 
350
CCGTCAACAT ACTCCAAATC CTTCACTCCC AGCTAAAGAC ACAAGCTGTG 
400
AATCGGTGGT GACGAGTGGT CAGCACCAAT TGGCATCTCA AAATCCTCAG 
450
AGAGATGCTA GTCCTGCAGG ACTTTTGTCC ATTGCAGAAG AAACTTTAGC 
500
AGAGTTTCTT TCAAAGGCAA CTGGAACCGC TGTTGAGTGG GTTCAGATGC 
550
CTGGAATGAA GCCTGGTCCG GATTCCATTG GAATCATCGC TATTTCTCAT 
600
GGTTGCACTG GTGTGGCAGC ACGCGCCTGT GGCCTAGTGG GTCTTGAGCC 
650
TACAAGGGTT GCAGAGATTG TCAAGGATCG TCCTTCGTGG TTCCGCGAAT 
700
GTCGAGCTGT TGAAGTTATG AACGTGTTGC CAACTGCCAA TGGTGGAACC 
750
GTTGAGCTGC TTTATATGCA GCTCTATGCA CCAACTACAT TGGCCCCACC 
800
ACGCGATTTC TGGCTGTTAC GTTACACCTC TGTTTTAGAA GATGGCAGCC 
850
TTGTGGTGTG CGAGAGATCT CTTAAGAGCA CTCAAAATGG TCCTAGTATG 
900
CCACTGGTTC AGAATTTTGT GAGAGCAGAG ATGCTTTCCA GTGGGTACTT 
950
GATACGGCCT TGTGATGGTG GTGGCTCAAT CATACACATA GTGGATCATA 
1000
TGGATTTGGA GGCTTGTAGC GTGCCTGAGG TCTTGCGCCC GCTCTATGAG 
1050
TCACCCAAAG TACTTGCACA GAAGACAACA ATGGCGGCAC TGCGTCAGCT 
1100
CAAGCAAATA GCTCAGGAGG TTACTCAGAC TAATAGTAGT GTTAATGGGT 
1150
GGGGACGGCG TCCTGCTGCC TTAAGAGCTC TCAGCCAGAG GCTAAGCAGA 
1200
GGCTTCAATG AAGCTGTAAA TGGTTTCACT GATGAAGGAT GGTCAGTGAT 
1250
AGGAGATAGC ATGGATGATG TCACAATCAC TGTAAACTCT TCTCCAGACA 
1300
AGCTAATGGG TCTAAATCTT ACATTTGCCA ATGGCTTTGC TCCTGTAAGC 
1350
AATGTTGTTT TATGCGCAAA AGCATCAATG CTTTTACAGA ATGTTCCTCC 
1400
GGCGATCCTG CTTCGGTTTC TGAGGGAGCA TAGGTCAGAA TGGGCTGACA 
1450
ACAACATTGA TGCGTATCTA GCAGCAGCAG TTAAAGTAGG GCCTTGTAGT 
1500
GCCCGAGTTG GAGGATTTGG AGGGCAGGTT ATACTTCCAC TTGCTCATAC 
1550
TATTGAGCAT GAAGAGTTTA TGGAAGTCAT CAAATTGGAA GGTCTTGGTC 
1600
ATTCCCCTGA AGATGCAATC GTTCCAAGAG ATATCTTCCT TCTTCAACTT 
1650
TGTAGCGGAA TGGATGAAAA TGCTGTAGGA ACCTGTGCGG AACTTATATT 
1700
TGCTCCAATC GATGCTTCGT TTGCGGATGA TGCACCTCTG CTTCCTTCTG 
1750
GTTTTCGTAT TATCCCTCTT GATTCCGCAA AGCAGGAAGT ATCTAGCCCA 
1800
AACCGAACCT TGGATCTTGC TTCGGCACTG GAAATTGGTT CAGCTGGAAC 
1850
AAAAGCCTCA ACTGATCAAT CAGGAAACTC CACATGTGCA AGATCTGTGA 
1900
TGACAATAGC ATTTGAGTTT GGTATCGAGA GCCATATGCA AGAACATGTA 
1950
GCATCCATGG CTAGGCAGTA TGTTCGAGGT ATCATATCAT CGGTGCAGAG 
2000
AGTAGCATTG GCTCTTTCTC CTTCTCATAT CAGCTCACAA GTTGGTCTAC 
2050
GCACTCCTTT GGGTACTCCT GAAGCCCAAA CACTTGCTCG TTGGATTTGC 
2100
CAGAGTTACA GGGGCTACAT GGGTGTTGAG CTACTTAAAT CAAACAGTGA 
2150
CGGCAATGAA TCTATTCTTA AGAATCTTTG GCATCACACT GATGCTATAA 
2200
TCTGCTGCTC AATGAAGGCC TTGCCCGTCT TCACATTTGC AAACCAGGCG 
2250
GGACTTGACA TGCTGGAGAC TACATTAGTT GCTCTTCAAG ACATCTCTTT 
2300
AGAGAAGATA TTTGATGACA ATGGAAGAAA GACTCTTTGC TCTGAGTTCC 
2350
CACAGATCAT GCAACAGGGC TTCGCGTGCC TTCAAGGCGG GATATGTCTC 
2400
TCAAGCATGG GGAGACCAGT TTCGTATGAG AGAGCAGTTG CTTGGAAAGT 
2450
ACTCAATGAA GAAGAAAATG CTCATTGCAT CTGCTTTGTG TTCATCAATT 
2500
GGTCCTTTGT GTGA
2550

>AT1G52150.2 longest ORF length:837
MAMSCKDGKL GCLDNGKYVR YTPEQVEALE RLYHDCPKPS SIRRQQLIRE 
50
CPILSNIEPK QIKVWFQNRR CREKQRKEAS RLQAVNRKLT AMNKLLMEEN 
100
DRLQKQVSQL VHENSYFRQH TPNPSLPAKD TSCESVVTSG QHQLASQNPQ 
150
RDASPAGLLS IAEETLAEFL SKATGTAVEW VQMPGMKPGP DSIGIIAISH 
200
GCTGVAARAC GLVGLEPTRV AEIVKDRPSW FRECRAVEVM NVLPTANGGT 
250
VELLYMQLYA PTTLAPPRDF WLLRYTSVLE DGSLVVCERS LKSTQNGPSM 
300
PLVQNFVRAE MLSSGYLIRP CDGGGSIIHI VDHMDLEACS VPEVLRPLYE 
350
SPKVLAQKTT MAALRQLKQI AQEVTQTNSS VNGWGRRPAA LRALSQRLSR 
400
GFNEAVNGFT DEGWSVIGDS MDDVTITVNS SPDKLMGLNL TFANGFAPVS 
450
NVVLCAKASM LLQNVPPAIL LRFLREHRSE WADNNIDAYL AAAVKVGPCS 
500
ARVGGFGGQV ILPLAHTIEH EEFMEVIKLE GLGHSPEDAI VPRDIFLLQL 
550
CSGMDENAVG TCAELIFAPI DASFADDAPL LPSGFRIIPL DSAKQEVSSP 
600
NRTLDLASAL EIGSAGTKAS TDQSGNSTCA RSVMTIAFEF GIESHMQEHV 
650
ASMARQYVRG IISSVQRVAL ALSPSHISSQ VGLRTPLGTP EAQTLARWIC 
700
QSYRGYMGVE LLKSNSDGNE SILKNLWHHT DAIICCSMKA LPVFTFANQA 
750
GLDMLETTLV ALQDISLEKI FDDNGRKTLC SEFPQIMQQG FACLQGGICL 
800
SSMGRPVSYE RAVAWKVLNE EENAHCICFV FINWSFV
850