fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G27220 BLH5 BEL1-like homeodomain 5 (.1.2)

>AT2G27220.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
NcoI C|CATGG 422
NdeI CA|TATG 532
StyI C|C[AT][AT]GG 422, 1042
XhoI C|TCGAG 155, 845


Click here to view TAIR data

>AT2G27220.1 length:1296
ATGGCTGCTT TCTTTCTTGG AGAATCTGAA ATGAGAGAAC ACTCTTCTGA 
50
TCTTTTTATG ATGACTCTGA ATCCGTTTCG CGAGCAGACA ACGACCACTA 
100
ATGCTCATGA CGATCACTTC TACAACTTGT GCTTTGGTTC CCAACAATAT 
150
AGACCTCGAG ATGAAGTAGG TCATATAGAA CAAGGAAATT CTTCCATCTC 
200
CACTTTTTCA AACGGAGGAG TCTTCAGGGC TTTGGCTCCG ATCTACTTGA 
250
AAGCGGCTCA AGAATTACTC AATGAGATTG TCAATGTTGG AAACGGTAGC 
300
CACGGCGCAA AACAAGAGCG ACCGGTGAGT AAAGAGTCCA CGATTTATGG 
350
AGTTGAGGAC ATCAATGGTG GCTATAAGCC TGGCGTAGCT GCTTTGCAAA 
400
TGAAGAAAGC AAAACTCATC TCCATGGGTG AAATGGTGGA ACAGAGATAC 
450
AAGCAATACC ATGACCAAAT GCAGACTATA ATCTCATCGT TTGAGCAAGC 
500
TGCGGGTTTA GGCTCAGCAA ACTCATACAC ACATATGGCG TTACAAACAA 
550
TATCAAAGCA GTTTCGTGCT GTAAAAGACA TGATAAGTTT GCAAATCAAG 
600
CAAATAAACA AGCTCTTGGG ACAAAAGGAA TTTGACGAGC AGCTTAAGAA 
650
GTTGGGAAAG ATGGCACATC ACCATTCAAA TGCTTGGAGA CCGCAGAGAG 
700
GTTTGCCCGA AAAAGCTGTT TCCGTTCTAC GCTCTTGGCT CTTTGAGCAT 
750
TTTCTTCATC CATATCCGAG GGATTTGGAT AAGGTAATGC TTGCCAAACA 
800
GACTGGCCTT ACTAAGAGTC AGGTGTCAAA TTGGTTCATT AATGCTCGAG 
850
TTCGAATGTG GAAGCCACTG GTGGAGGAAC TTTATTCGGA AGAAATGGAT 
900
ATTGAAGAAA GCAGAAAAGG AAGTGACCGG TATAGTACCA AAGGTTCATC 
950
TTCAAAGCAA CCGTACAATA ATACAACTTC AAATGAATCT TCGAACACGA 
1000
TCCTACCCGC CTTTCGTCAA GGATTCACTG AAACTGAAAC CCCTAGGCAA 
1050
AATTCATCCT CAAGTTGCAG CGTAGTCATG AGGTTCACGA AGCAACACAT 
1100
GAATCAAGCG AACTTCATCA ATTTCAACGG AGGGTTCGAA AACTATCACA 
1150
CAATGGATGG AAACAGCGTC TCCCTTTCCC TCGGCCTGCC TCATTCTTGT 
1200
GACCAAACCT TTAATAACAT TCATTTTGAG TCAACAAGTC ATGGAACTGA 
1250
GAACTCGGCC ATATATTCAT CTTCAACTTA TCAAATCATG GATTAG
1300

>AT2G27220.1 longest ORF length:431
MAAFFLGESE MREHSSDLFM MTLNPFREQT TTTNAHDDHF YNLCFGSQQY 
50
RPRDEVGHIE QGNSSISTFS NGGVFRALAP IYLKAAQELL NEIVNVGNGS 
100
HGAKQERPVS KESTIYGVED INGGYKPGVA ALQMKKAKLI SMGEMVEQRY 
150
KQYHDQMQTI ISSFEQAAGL GSANSYTHMA LQTISKQFRA VKDMISLQIK 
200
QINKLLGQKE FDEQLKKLGK MAHHHSNAWR PQRGLPEKAV SVLRSWLFEH 
250
FLHPYPRDLD KVMLAKQTGL TKSQVSNWFI NARVRMWKPL VEELYSEEMD 
300
IEESRKGSDR YSTKGSSSKQ PYNNTTSNES SNTILPAFRQ GFTETETPRQ 
350
NSSSSCSVVM RFTKQHMNQA NFINFNGGFE NYHTMDGNSV SLSLGLPHSC 
400
DQTFNNIHFE STSHGTENSA IYSSSTYQIM D
450