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| Locus | Common name | Short description |
| AT4G13040 | Integrase-type DNA-binding superfamily protein (.1.2.3) |
>AT4G13040.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflII, AflIII, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BfaI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BslI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstF5I, BstNI, BstUI, BstXI, BstYI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HindIII, HpaI, HphI, Hpy99I, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, MspA1I, NaeI, , NarI, NcoI, NgoMIV, NheI, NotI, NruI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SnaBI, SpeI, SspI, StuI, StyI, SwaI, TliI, Tth111I, XbaI, XcmI, XhoI, XmnI
| Name | Recognition sequence | Cut positions |
| AccI | GT|[AC][TG]AC | 358 |
| AciI | C|CGC | 287, 384 |
| AgeI | A|CCGGT | 252 |
| AluI | AG|CT | 5, 124, 498, 536 |
| AvaI | C|PyCGPuG | 136 |
| AvaII | G|G[AT]CC | 42 |
| BanII | GPuGCPy|C | 499 |
| BclI | T|GATCA | 92 |
| BsaJI | C|CNNGG | 136 |
| BsaWI | [AT]|CCGG[AT] | 252 |
| BsiHKAI | G[AT]GC[AT]|C | 499 |
| BsoBI | C|PyCGPuG | 136 |
| Bsp1286I | G[GAT]GC[CAT]|C | 499 |
| BsrFI | Pu|CCGGPy | 252 |
| BsrI | ACTGGN| | 97 |
| BssKI | |CCNGG | 135 |
| Cac8I | GCN|NGC | 141, 381, 448, 628 |
| Cfr10I | [AG]|CCGG[TC] | 252 |
| DdeI | C|TNAG | 82, 416 |
| DpnI | GA-CH3|TC | 91, 619 |
| DpnII | |GATC | 91, 619 |
| EcoRV | GAT|ATC | 244 |
| Fnu4HI | GC|NGC | 123, 287, 305, 384, 444, 465 |
| HaeIII | GG|CC | 138 |
| HinfI | G|ANTC | 101, 264, 355, 663 |
| HpaII | C|CGG | 135, 251 |
| Hpy188I | TCN|GA | 231, 240, 261, 504, 666 |
| HpyCH4III | ACN|GT | 150, 159 |
| HpyCH4IV | A|CGT | 16 |
| HpyCH4V | TG|CA | 219, 557 |
| MboI | |GATC | 91, 619 |
| MseI | T|TAA | 74, 255, 390 |
| MspI | C|CGG | 135, 251 |
| MwoI | GCNNNNN|NNGC | 123 |
| N.BstNBI | GAGTCNNNN|N | 360 |
| NciI | CC|[CG]GG | 135 |
| NdeI | CA|TATG | 217 |
| NlaIII | CATG| | 339, 370, 472, 605, 631 |
| NlaIV | GGN|NCC | 486 |
| NsiI | ATGCA|T | 220 |
| NspI | PuCATG|Py | 632 |
| PsiI | TTA|TAA | 129 |
| RsaI | GT|AC | 323 |
| SacI | GAGCT|C | 499 |
| Sau3AI | |GATC | 91, 619 |
| Sau96I | G|GNCC | 42, 138 |
| ScrFI | CC|NGG | 135 |
| SmaI | CCC|GGG | 136 |
| SmlI | C|TPyPuAG | 434 |
| SphI | GCATG|C | 632 |
| Taqƒ¿I | T|CGA | 396 |
| TfiI | G|A[AT]TC | 101, 264, 663 |
| TseI | G|C[AT]GC | 123, 305, 444, 465 |
| Tsp45I | |GT[CG]AC | 57 |
| Tsp509I | |AATT | 257, 554, 571 |
| TspRI | NNCA[CG]TGNN| | 97 |
| XmaI | C|CCGGG | 136 |
Click here to view TAIR data
>AT4G13040.1 length:681
ATGGTGAGCT TACGAAGACG TAGGCTATTG GGTCTTTGTT GTGGACCAAA | 50 |
TGGTTATGTG ACACCACTTC CATTTTTAAC TGCTGAGGAG ATGATCACTG | 100 |
GGATTCCAAA TCCTAATGCC AGAGCAGCTT ATAATCCCGG GCCAGCAGAA | 150 |
ACGGTTACAA CGGTTATCGT GGAGAAAAAG GCTATTGAAG AAAGAAGCCG | 200 |
AAGAACTCGG TCAAAACATA TGCATTTCAG GTCTGATTAT TCAGATATCT | 250 |
CACCGGTTAA TTCTGATTCC ATCTCACCAA AATACCAGCC GCCGAAACGA | 300 |
AGAAAGCAGC ATAGAAGAAA GCGAGTACAT AACCAAGAAC CATGTTTGAT | 350 |
GAGAGGAGTC TACTACAAAA ACATGAAATG GCAAGCCGCC ATTAAAGTCG | 400 |
AGAAGAAACA AATCCACTTA GGCACTTTCT CTTCTCAAGA AGAGGCTGCT | 450 |
CGCTTATACG ATAGGGCTGC TTTCATGTGT GGGAGGGAAC CGAACTTTGA | 500 |
GCTCTCGGAA GAAGTTATAC GAGAACTCAA ACAGCAAAGC TGGGAAGAGT | 550 |
TCTTGAATTG CACACGCCGA ACAATTACGA ACAAAAAACC AAAGAGTAGG | 600 |
ATAGAACATG AGGATACGAA GATCAATGCC AGCATGCCAC ATCAACCAGA | 650 |
AGAAGAAGAG CAAGATTCAG ACAAAATGTG A | 700 |
>AT4G13040.1 longest ORF length:226
MVSLRRRRLL GLCCGPNGYV TPLPFLTAEE MITGIPNPNA RAAYNPGPAE | 50 |
TVTTVIVEKK AIEERSRRTR SKHMHFRSDY SDISPVNSDS ISPKYQPPKR | 100 |
RKQHRRKRVH NQEPCLMRGV YYKNMKWQAA IKVEKKQIHL GTFSSQEEAA | 150 |
RLYDRAAFMC GREPNFELSE EVIRELKQQS WEEFLNCTRR TITNKKPKSR | 200 |
IEHEDTKINA SMPHQPEEEE QDSDKM | 250 |