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| Locus | Common name | Short description |
| AT4G13040 | Integrase-type DNA-binding superfamily protein (.1.2.3) |
>AT4G13040.2 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BfaI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BslI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstF5I, BstNI, BstUI, BstXI, BstYI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HindIII, HpaI, HphI, Hpy99I, HpyCH4IV, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, MspA1I, NaeI, , NarI, NcoI, NgoMIV, NheI, NotI, NruI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SnaBI, SpeI, SspI, StuI, StyI, SwaI, TliI, Tsp45I, TspRI, Tth111I, XbaI, XcmI, XhoI, XmnI
| Name | Recognition sequence | Cut positions |
| AccI | GT|[AC][TG]AC | 190 |
| AciI | C|CGC | 119, 216 |
| AluI | AG|CT | 9, 330, 368 |
| AvaI | C|PyCGPuG | 21 |
| BanII | GPuGCPy|C | 331 |
| BsaJI | C|CNNGG | 21 |
| BsiHKAI | G[AT]GC[AT]|C | 331 |
| BsoBI | C|PyCGPuG | 21 |
| Bsp1286I | G[GAT]GC[CAT]|C | 331 |
| BssKI | |CCNGG | 20 |
| Cac8I | GCN|NGC | 26, 213, 280, 460 |
| DdeI | C|TNAG | 248 |
| DpnI | GA-CH3|TC | 451 |
| DpnII | |GATC | 451 |
| Fnu4HI | GC|NGC | 8, 119, 137, 216, 276, 297 |
| HaeIII | GG|CC | 23 |
| HinfI | G|ANTC | 187, 495 |
| HpaII | C|CGG | 20 |
| Hpy188I | TCN|GA | 111, 336, 498 |
| HpyCH4III | ACN|GT | 35, 44 |
| HpyCH4V | TG|CA | 104, 389 |
| MboI | |GATC | 451 |
| MseI | T|TAA | 222 |
| MspI | C|CGG | 20 |
| MwoI | GCNNNNN|NNGC | 8 |
| N.BstNBI | GAGTCNNNN|N | 192 |
| NciI | CC|[CG]GG | 20 |
| NdeI | CA|TATG | 102 |
| NlaIII | CATG| | 171, 202, 304, 437, 463 |
| NlaIV | GGN|NCC | 318 |
| NsiI | ATGCA|T | 105 |
| NspI | PuCATG|Py | 464 |
| PsiI | TTA|TAA | 14 |
| RsaI | GT|AC | 155 |
| SacI | GAGCT|C | 331 |
| Sau3AI | |GATC | 451 |
| Sau96I | G|GNCC | 23 |
| ScrFI | CC|NGG | 20 |
| SmaI | CCC|GGG | 21 |
| SmlI | C|TPyPuAG | 266 |
| SphI | GCATG|C | 464 |
| Taqƒ¿I | T|CGA | 228 |
| TfiI | G|A[AT]TC | 495 |
| TseI | G|C[AT]GC | 8, 137, 276, 297 |
| Tsp509I | |AATT | 386, 403 |
| XmaI | C|CCGGG | 21 |
Click here to view TAIR data
>AT4G13040.2 length:513
ATGCCAGAGC AGCTTATAAT CCCGGGCCAG CAGAAACGGT TACAACGGTT | 50 |
ATCGTGGAGA AAAAGGCTAT TGAAGAAAGA AGCCGAAGAA CTCGGTCAAA | 100 |
ACATATGCAT TTCAGACCAG CCGCCGAAAC GAAGAAAGCA GCATAGAAGA | 150 |
AAGCGAGTAC ATAACCAAGA ACCATGTTTG ATGAGAGGAG TCTACTACAA | 200 |
AAACATGAAA TGGCAAGCCG CCATTAAAGT CGAGAAGAAA CAAATCCACT | 250 |
TAGGCACTTT CTCTTCTCAA GAAGAGGCTG CTCGCTTATA CGATAGGGCT | 300 |
GCTTTCATGT GTGGGAGGGA ACCGAACTTT GAGCTCTCGG AAGAAGTTAT | 350 |
ACGAGAACTC AAACAGCAAA GCTGGGAAGA GTTCTTGAAT TGCACACGCC | 400 |
GAACAATTAC GAACAAAAAA CCAAAGAGTA GGATAGAACA TGAGGATACG | 450 |
AAGATCAATG CCAGCATGCC ACATCAACCA GAAGAAGAAG AGCAAGATTC | 500 |
AGACAAAATG TGA | 550 |
>AT4G13040.2 longest ORF length:170
MPEQLIIPGQ QKRLQRLSWR KRLLKKEAEE LGQNICISDQ PPKRRKQHRR | 50 |
KRVHNQEPCL MRGVYYKNMK WQAAIKVEKK QIHLGTFSSQ EEAARLYDRA | 100 |
AFMCGREPNF ELSEEVIREL KQQSWEEFLN CTRRTITNKK PKSRIEHEDT | 150 |
KINASMPHQP EEEEQDSDKM | 200 |