| Locus |
Common name |
Short description |
| AT4G27330 |
NZZ, SPL |
NOZZLE, sporocyteless (SPL) (.1) |
>AT4G27330.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccII(FnuDII), AfeI, AflII, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstEII, BstUI, BstXI, BstZ17I, Bsu36I, BtsI, Cac8I, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HhaI, HinP1I, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, MspA1I, NaeI, , NarI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PstI, PvuI, PvuII, RsrII, SacII, SalI, SapI, SbfI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, Tth111I, XbaI, XcmI, XmnI
| Name |
Recognition sequence |
Cut positions |
| AccI
| GT|[AC][TG]AC |
316 |
| AccIII(BspMII)
| T|CCGGA |
104 |
| AciI
| C|CGC |
243 |
| AclI
| AA|CGTT |
177, 536 |
| AflIII
| A|CPuPyGT |
263 |
| AgeI
| A|CCGGT |
312 |
| AluI
| AG|CT |
89, 201, 347, 459, 700, 785, 936 |
| AlwNI
| CAGNNN|CTG |
710 |
| ApoI
| Pu|AATTPy |
778 |
| AseI
| AT|TAAT |
730 |
| AvaI
| C|PyCGPuG |
205, 321, 355 |
| AvaII
| G|G[AT]CC |
765 |
| BanII
| GPuGCPy|C |
460 |
| BclI
| T|GATCA |
549, 681 |
| BfaI
| C|TAG |
693, 717, 804 |
| BsaBI
| GATNN|NNATC |
548, 632, 653 |
| BsaJI
| C|CNNGG |
321, 424, 666, 847 |
| BsaWI
| [AT]|CCGG[AT] |
104, 312 |
| BsiHKAI
| G[AT]GC[AT]|C |
460 |
| BslI
| CCNNNNN|NNGG |
618, 810 |
| BsoBI
| C|PyCGPuG |
205, 321, 355 |
| Bsp1286I
| G[GAT]GC[CAT]|C |
460 |
| BspDI
| AT|CGAT |
279 |
| BspEI
| T|CCGGA |
104 |
| BspHI
| T|CATGA |
456 |
| BsrFI
| Pu|CCGGPy |
312 |
| BssKI
| |CCNGG |
138, 320, 410, 846 |
| BstBI
| TT|CGAA |
588 |
| BstF5I
| GGATGNN| |
544 |
| BstNI
| CC|[AT]GG |
138 |
| BstYI
| Pu|GATCPy |
101, 368 |
| BtgI
| C|CPuPyGG |
424 |
| BtrI
| CAC|GTC |
264 |
| Cfr10I
| [AG]|CCGG[TC] |
312 |
| ClaI
| AT|CGAT |
279 |
| DdeI
| C|TNAG |
63 |
| DpnI
| GA-CH3|TC |
29, 56, 100, 141, 280, 367, 403, 548, 567, 626, 647, 680, 813 |
| DpnII
| |GATC |
29, 56, 100, 141, 280, 367, 403, 548, 567, 626, 647, 680, 813 |
| Fnu4HI
| GC|NGC |
243, 699 |
| HincII
| GTPy|PuAC |
24, 85 |
| HindIII
| A|AGCTT |
937 |
| HinfI
| G|ANTC |
122, 217, 382, 602, 688 |
| HpaII
| C|CGG |
93, 103, 311, 320, 410, 845 |
| Hpy188I
| TCN|GA |
43, 62, 131, 212, 256, 551, 611, 645, 656 |
| Hpy99I
| CG[AT]CG| |
41, 886 |
| HpyCH4III
| ACN|GT |
252, 574 |
| HpyCH4IV
| A|CGT |
176, 263, 535, 884 |
| HpyCH4V
| TG|CA |
905 |
| MboI
| |GATC |
29, 56, 100, 141, 280, 367, 403, 548, 567, 626, 647, 680, 813 |
| MseI
| T|TAA |
489, 729, 940 |
| MspI
| C|CGG |
93, 103, 311, 320, 410, 845 |
| MwoI
| GCNNNNN|NNGC |
346, 699 |
| N.BstNBI
| GAGTCNNNN|N |
127, 387 |
| NciI
| CC|[CG]GG |
320, 410, 846 |
| NcoI
| C|CATGG |
424 |
| NlaIII
| CATG| |
19, 423, 455, 790 |
| NlaIV
| GGN|NCC |
662, 765 |
| PaeR7I
| C|TCGAG |
205 |
| PspGI
| |CC[AT]GG |
138 |
| RsaI
| GT|AC |
308, 720, 832 |
| SacI
| GAGCT|C |
460 |
| Sau3AI
| |GATC |
29, 56, 100, 141, 280, 367, 403, 548, 567, 626, 647, 680, 813 |
| Sau96I
| G|GNCC |
765 |
| ScaI
| AGT|ACT |
721 |
| ScrFI
| CC|NGG |
138, 320, 410, 846 |
| SmaI
| CCC|GGG |
321 |
| SmlI
| C|TPyPuAG |
205 |
| StyI
| C|C[AT][AT]GG |
424, 666 |
| Taqƒ¿I
| T|CGA |
143, 204, 219, 278, 405, 565, 587 |
| TfiI
| G|A[AT]TC |
217, 602, 688 |
| TliI
| C|TCGAG |
205 |
| TseI
| G|C[AT]GC |
699 |
| Tsp45I
| |GT[CG]AC |
514, 890 |
| Tsp509I
| |AATT |
777 |
| TspRI
| NNCA[CG]TGNN| |
117, 873 |
| XhoI
| C|TCGAG |
205 |
| XmaI
| C|CCGGG |
321 |
Click here to view TAIR data
>AT4G27330.1 length:945
ATGGCGACTT CTCTCTTCTT CATGTCAACA GATCAAAACT CCGTCGGAAA | 50 |
CCCAAACGAT CTTCTGAGAA ACACCCGTCT TGTCGTCAAC AGCTCCGGCG | 100 |
AGATCCGGAC AGAGACACTG AAGAGTCGTG GTCGGAAACC AGGATCGAAG | 150 |
ACAGGTCAGC AAAAACAGAA GAAACCAACG TTGAGAGGAA TGGGTGTAGC | 200 |
AAAGCTCGAG CGTCAGAGAA TCGAAGAAGA AAAGAAGCAA CTCGCCGCCG | 250 |
CCACAGTCGG AGACACGTCA TCAGTAGCAT CGATCTCTAA CAACGCTACC | 300 |
CGTTTACCCG TACCGGTAGA CCCGGGTGTT GTGCTACAAG GCTTCCCAAG | 350 |
CTCACTCGGG AGCAACAGGA TCTATTGTGG TGGAGTCGGG TCGGGTCAGG | 400 |
TTATGATCGA CCCGGTTATT TCTCCATGGG GTTTTGTTGA GACCTCCTCC | 450 |
ACTACTCATG AGCTCTCTTC AATCTCAAAT CCTCAAATGT TTAACGCTTC | 500 |
TTCCAATAAT CGCTGTGACA CTTGCTTCAA GAAGAAACGT TTGGATGGTG | 550 |
ATCAGAATAA TGTAGTTCGA TCCAACGGTG GTGGATTTTC GAAATACACA | 600 |
ATGATTCCTC CTCCGATGAA CGGCTACGAT CAGTATCTTC TTCAATCAGA | 650 |
TCATCATCAG AGGAGCCAAG GTTTCCTTTA TGATCATAGA ATCGCTAGAG | 700 |
CAGCTTCAGT TTCTGCTTCT AGTACTACTA TTAATCCTTA TTTCAACGAG | 750 |
GCAACAAATC ATACGGGACC AATGGAGGAA TTTGGGAGCT ACATGGAAGG | 800 |
AAACCCTAGA AATGGATCAG GAGGTGTGAA GGAGTACGAG TTTTTTCCGG | 850 |
GGAAATATGG TGAAAGAGTT TCAGTGGTGG CTAAAACGTC GTCACTCGTA | 900 |
GGTGATTGCA GTCCTAATAC CATTGATTTG TCCTTGAAGC TTTAA | 950 |
>AT4G27330.1 longest ORF length:314
MATSLFFMST DQNSVGNPND LLRNTRLVVN SSGEIRTETL KSRGRKPGSK | 50 |
TGQQKQKKPT LRGMGVAKLE RQRIEEEKKQ LAAATVGDTS SVASISNNAT | 100 |
RLPVPVDPGV VLQGFPSSLG SNRIYCGGVG SGQVMIDPVI SPWGFVETSS | 150 |
TTHELSSISN PQMFNASSNN RCDTCFKKKR LDGDQNNVVR SNGGGFSKYT | 200 |
MIPPPMNGYD QYLLQSDHHQ RSQGFLYDHR IARAASVSAS STTINPYFNE | 250 |
ATNHTGPMEE FGSYMEGNPR NGSGGVKEYE FFPGKYGERV SVVAKTSSLV | 300 |
GDCSPNTIDL SLKL | 350 |
|