fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G32040 KNAT5 KNOTTED1-like homeobox gene 5 (.1)

>AT4G32040.1 genomic map

>>Show CDS map




Uncut enzymes: ApaI, AscI, KpnI, NdeI, NotI, PvuII, SacI, SalI, SmaI, SpeI
Name Recognition sequence Cut positions
BamHI G|GATCC 3624
BglII A|GATCT 2197, 3437, 5351, 5903
EcoRI G|AATTC 5985, 7005
EcoRV GAT|ATC 6934
HindIII A|AGCTT 129, 1647, 1713, 3297, 4836, 7098, 7541
HpaI GTT|AAC 7681
NcoI C|CATGG 7500
NheI G|CTAGC 1186, 4407
PacI TTAAT|TAA 3971
PstI CTGCA|G 6929, 7523, 7767
StyI C|C[AT][AT]GG 869, 1410, 5630, 7500
XbaI T|CTAGA 3783
XhoI C|TCGAG 1910, 2817, 4732


Click here to view TAIR data

>AT4G32040 genomic sequence (4062-4604,4989-5109,5202-5401,5491-5622,5704-5843,5929-5944,) length:7791
tctataaaag aaacataagg taagatatat aatcattaat gacagaaact 
50
cttttttact catccacaat gtagcaactt gcctttacct attaacggcg 
100
gtacacagtc gtcaattgtt cattggtcaa gcttagcaaa accattgagc 
150
cacgtcagtt tttttttgtt ggttcctttg caatactcta cgaacatcat 
200
aattgatgag agcataggaa gattttctac ctaacaaggg aaaaaaaagc 
250
aaaacgaaaa agacgaaccc taaagtaatt ttgcctattt ttaaaaattt 
300
attcttttaa tttcagcatt atgccaaatt tataattttg cgagagaatt 
350
ttaatttggg gaatctttac atatttttca catacccttt ccccacacaa 
400
ctcagttttt gggtcccacc tttcctttct tatttttttt gtcatcacaa 
450
acaaaccatt gagataaaaa aattaaatcc aaatctgcaa tccatccagc 
500
cacagacccg atcttgcatt ttcgcatcga cattaaaatg gcaataaaat 
550
aaatcatttt ttttttcttt tcgaaaagaa caaagaaaaa tgagaaaagg 
600
aagaaaaaag agatagagga ataatttaga gggagcctcg tatataacac 
650
cattcccatc tctctctctc tctttctcct ctatttcgat atttcttctt 
700
cttctccttc tctctccctt cgtcattatc tctcttctgt aacttctctt 
750
tctttccctc tctctctttc gctgcttctc ttctgtatct gattcccttt 
800
tttacgggag ctgtagattt gagtagtgta agcgtcgATG AAGAAGGTTA 
850
CATCGTCTAA GATTCCGGCC AAGGATGATT GGGTGGCTGT AGCGATAACT 
900
GACGACGATT TGGTCGTTGA GCTTCTTTTA CGGCTGAAGC ATGCCGGAAC 
950
GGTAGTGTCG GATAATCCGG CGGTGATTCT CCCTCCGTTG CGGTGGGGAA 
1000
TCCGTCAACG ACGGTCTCGT TCCTCAAGAT TTGGTGGCGG CGGCGGCGTT 
1050
CTCGTTTCCT TGAAGAAAGA TGTCGATTCC GTTAGAGCCA GTCCGAAGAC 
1100
TCCTCTCTCG TGGAGCGGCG GATCTGGAAG TGGTGGCGGC TCTGCTTCTC 
1150
CTTCCGCCGA TGGATTCGAG GATAACAGTC GCCAAGCTAG CTGCTCTACA 
1200
TCTACAGGAT CTGGATCTAA Ggtaactttc tcttttccct atcgtgattt 
1250
tcaacttttg cctctcgatt tagtcttctc tctctatctt ctttctctca 
1300
attacgaatc cggtagctcc ggagagatgg caaatccgtc atctcgctgg 
1350
ataatccgat tccgatctgg ccgataaatc tggatttagc cgttcgtaat 
1400
tgagaagatc cttggccgtc tctctgtttt tcttcatttt ttttcctaaa 
1450
atccataaag tttagcctga cgtcatctct cgcacgcttc aattctcact 
1500
agaacgtatt tagtctgttt tcttcaactt ctaacaaatt caccggaaaa 
1550
aattcctccg ccgtgattcg ccgatgacac cgtcggccgg agccatcctg 
1600
cttctaggtt aaattcatct aatctccaaa aagtcaaagc cactttaagc 
1650
ttaatttcct tgttttctgc tcattttttg taattagaaa actctactaa 
1700
tcttctgtaa caaagcttaa taagagacct gtttttctcg gtacgcattg 
1750
aaccggatct tgcgtggccg gttagatgtg gatttttaga aatcggtcaa 
1800
ctttaatttt gtcttgagga ataattaaag ctccttttag attttggggg 
1850
tagtacagct taacagctag ttggtcaaac gcgtccgcgt tttattgaac 
1900
gttttgatgc tcgagacggt agcgttttgt gggttgaaag ttgaaacgag 
1950
taaaatgatc ttgtcggaga gattggtatc acgtgatctt taaaagagtg 
2000
atgacgatag atgacaatgc ccatgacacg gaataatcat gatgtggcat 
2050
caaatcctca ctataaaaat tctttcccaa ttatatattt gagatttttt 
2100
aattttatgc tctatttggt ttcttcgata tatttttctt acttgtttga 
2150
aatttctgtt gtgggaaaag aaacttttta ccggtatgtt aaaataagat 
2200
cttgggtatt gattataaaa gtaaaacagt tgtcgttatc ttcagccatt 
2250
taatagttga ctaatcaaat gcgtttttgt tttgcagGTT TTTCCCACAA 
2300
ACGAAATCAC CAGTTGTTTC TCCAAGAGAT TGAAGAAGAG GAAGgtaaat 
2350
ataaagtctc ctttttgaat ttcaagtaca cactccaaaa ttcaaatttt 
2400
attgagctga tggtttttta ttcttttaat atttggcagT CATCTTTTGA 
2450
GCTTAAAAAT GAAGAGAACT TGAAGTTGAA GGAGAGACTT GACCTTGAAA 
2500
AGgtagattt tcgttgctat tctctgtttt attatcatgg ttttcattgt 
2550
attcttaaaa aaacccaata tttttccaca gGAGATTGCA AGTCTCCGAG 
2600
CAACATTCGA TGAACAAAAC CTTAGGAACC AAAAGCTGAA GAGGATTAAG 
2650
gtaacattta gattctccct aaccatcttt acagtaatca gatattccag 
2700
atcccttctc tctatttgct ggtctcatcg actcttgtgt tttcttgttt 
2750
cagCTTGACT TAAACTCAGG CCGTGTCACA AACAAGAAAC CTGTTGATTT 
2800
GATTCGTAAA TCACAACTCG AGCGGCTACA GGGATCAAAA TCTTGCAAAA 
2850
CCAGTGACTC GCAAAATCAG GGGAGTTTCT TCGTCCTCCC TGATCTCAAC 
2900
ATGGCGCCAT CCGAGGAAGA GATATTGTAC GGAACTAGCT AAaaactggc 
2950
ctatatgaag atttgcgatc gaattatagt gaagggaaga agggagctag 
3000
agatgtcaac taagaaaagt gaatgtaata agtggtgtaa tgaaactctc 
3050
ccgtcacatt ctggttttcc gtttccttct ttttttgggg taaaatgctc 
3100
aattacttct tgattttttc ttaggaagag ggtgaaaatt aggtttttac 
3150
tttttactcc ctccctccct ccctctctgt tttctttaat ttgatgtgtt 
3200
agaagaaaaa atttgtttta aatagatggt gttatcaatt tttaatgcaa 
3250
aattaactac tttttttttt ctttctttct ctttgtaccg atttaaaagc 
3300
ttttgttgga aattgtaaag aggaaaaagt aggacaacta atagactttt 
3350
tatgttccaa acattttctt cttcactatt ctccatacat tattatatta 
3400
aaaccctagt ttccgctcaa ctaatccaag acaagaagat ctatcaatct 
3450
ctttggacat tcatttttct actatttaat ttgaattttt ataatataaa 
3500
cttgggaggt gtaatgctat tggtgggttg tcggcgtgtt catggaaaaa 
3550
gattcgtttt taaatgccca ataaatttga gaaaaaattg ccaacttgtt 
3600
tatgagctta ttttcttttt catggatccc aagtcttttg tgtatagaga 
3650
ttaaaaaaaa atgacattcc ttcatgtaaa aaagaaaaaa atatctgggt 
3700
tttaaaaata tctacaatga gtttaatggt aaatatactt atcataattt 
3750
ggagaataaa gacctaaaga agaaaattac actctagaac agaagttttg 
3800
taagcaaatc attgctcaca aaacttgtga attacagaat tacaggctct 
3850
tgtaggttga gttattttat gcttcatttt ggttacaggc tttatgttga 
3900
cattaaaaca aagagattga agtagagtcc aaaaaaaaaa aaaatatata 
3950
taaatataaa attcaagatt aattaaaaaa tattggtctt cagagagata 
4000
aataactagg ggaaagagaa aacagtcttc tcttctccga tcccaaaaac 
4050
gcaggaaaac aATGTCGTTT AACAGCTCCC ACCTCCTTCC TCCACAAGAA 
4100
GACCTTCCTC TCCGACACTT CACCGATCAA TCACAGCAAC CTCCGCCGCA 
4150
GCGTCACTTC TCTGAAACAC CTTCGCTTGT CACCGCCAGT TTCCTCAACC 
4200
TCCCTACCAC CCTTACCACT GCGGATTCCG ATCTCGCTCC TCCGCACCGC 
4250
AACGGAGACA ATTCCGTTGC TGATACAAAC CCACGCTGGC TCTCCTTTCA 
4300
TTCGGAGATG CAAAATACTG GAGAAGTACG TTCTGAAGTT ATCGACGGAG 
4350
TCAACGCCGA TGGTGAAACG ATACTCGGCG TTGTAGGAGG TGAAGATTGG 
4400
CGGAGTGCTA GCTATAAGGC GGCGATTTTA AGACATCCGA TGTACGAGCA 
4450
GCTTCTTGCG GCTCACGTGG CTTGCCTTAG GGTTGCGACT CCCGTTGACC 
4500
AGATTCCGAG GATCGATGCT CAGCTCAGTC AGTTGCATAC CGTCGCCGCG 
4550
AAATACTCCA CTCTTGGTGT GGTTGTTGAC AACAAGGAAC TTGATCATTT 
4600
CATGgtaagt ttcactttct aattttgcaa aattttaatg ttttgaactg 
4650
tgaacgattc agccatttat ttctctttga ttatctgagt atagcaaatt 
4700
cacatttttg tgtggctcat tgttcccgct tctcgagtct tgcaatcgat 
4750
atgatctttg cttctacttt tttggttagc ttgtaattcg aattatgaac 
4800
tttgtctgac tcaaataagt tatatttgtt gcataaagct tcttctttga 
4850
tgactaatag tttgtctgat tcttgctgaa aaggactttg catgtccaag 
4900
agaaagaaag cataatctat tttttgtaac gttctgtttg tatgtcttat 
4950
ggattggaat cttacctttg attattatgt tgatgcagTC ACATTATGTT 
5000
GTCTTGTTAT GTTCATTTAA AGAACAACTC CAACACCACG TTTGTGTCCA 
5050
TGCAATGGAA GCCATTACGG CTTGTTGGGA GATTGAACAA TCACTGCAAT 
5100
CCCTAACTGg taacgtccca aatcattttt tttttttgtt attgtcttct 
5150
tgctttatgt gtgtcttggt tttatcggtt tttctttgtt ctggtttgta 
5200
gGAGTTTCTC CAAGTGAAAG TAATGGTAAG ACAATGTCGG ATGATGAAGA 
5250
TGATAATCAA GTAGAGAGCG AGGTGAACAT GTTTGATGGA AGTTTGGACG 
5300
GTTCAGATTG CTTGATGGGG TTTGGTCCTC TTGTTCCAAC CGAGAGAGAG 
5350
AGATCTTTGA TGGAACGTGT GAAGAAAGAA CTGAAGCATG AGCTTAAACA 
5400
Ggtaattgct tgatcaagct gcaatggtac atcaaactat acaaaacaca 
5450
ttgttaaatc atgttgctcg gtttcttttt tcccctgtag GGTTTCAAAG 
5500
AGAAGATTGT GGACATAAGA GAAGAGATAA TGAGGAAGAG AAGGGCGGGA 
5550
AAGTTGCCAG GAGATACGAC TTCTGTACTC AAAGAATGGT GGCGAACTCA 
5600
CTCGAAATGG CCATACCCAA CTgtaaacac cttggccgag aagttttgtt 
5650
accacattgt caaaagcaag gttttaattc gtgatttggt tttggaattg 
5700
cagGAGGAAG ATAAGGCAAA ACTGGTTCAA GAAACCGGTT TGCAGTTGAA 
5750
ACAGATCAAC AATTGGTTCA TCAACCAGAG GAAAAGAAAC TGGAACAGCA 
5800
ACTCTTCCAC GTCATCTACT CTCACCAAGA ACAAACGTAA ACGgtaaaac 
5850
aagatccgtt ctctttttca aattgcgcaa tttcattaaa ccaacccggt 
5900
caagatcttc ttttgtaacc aaactcagGA CCGGGAAGTC GTAGgtgaca 
5950
tagcggctaa ctagaggatg gttctttgcc atgtgaattc ttgggaaccg 
6000
tatatgaaag aaacgaatcc ggttctatgc tcgtacagag tgtgttattt 
6050
gtatagtgga taccggttag cctatgaaac cggattctgg agtccaaatt 
6100
gttgtttgta acgacttagt agtttttgga agtgatctgt ttcgttggtt 
6150
tgcgtcttgt aacgaacgct taagcaagtg tgggtttttt cttgtaaagt 
6200
gtcaatatgt tcgtttgtaa tgaatgtatc aagcaatatt tatcataatt 
6250
aaactagctt gaaatgtagt attacgatgt tgttgtgttc gtctgatttc 
6300
tctcaccggt tgatgcatgg ttacgttcgg ctcggttttt atatggttca 
6350
atttttaata tatcgataat tttaaatgat ttcacttgta ttattaacaa 
6400
agcccattgg tatttggccc aaaatctgaa tgccgactta atgacttgtt 
6450
tcttcttcct tcagcttctc caacgaacgg cttttgtttt agtttttttt 
6500
gcttaccttt ctctcgactt ggtctacttt tgttactctt tgagttgggt 
6550
gattATGGCA GCAGCACCAC AGGAGGAACG ATCTCCGTCG CTTGACGATT 
6600
GCCTTAAGCT ATTGAAAGGG GAGAGAGACG AGCAGAGGCT CGCCGGTCTA 
6650
CTTCTCGTCA CCAAATTCTG TAAGAACGAT GACATCGTTT CTCTCAACAA 
6700
GGTCTACGAA GCCGTTGGTA CTCACTTTCT CGACCGTCTT TTCCGTACTG 
6750
gtaatcaaaa ccccgaatta ttgatctttg tctcagtaaa tactaatatc 
6800
aattttgggg tttctacaaa gtgtgaattt tttagttgag atactaaagt 
6850
ttgttgctct gactggtttc gattttttgt tttgcagGTA GTGGCAGTGG 
6900
CGATGGGGTT GATAATCGTG ATGTGTATCT GCAGATATCT ATCACTGTTC 
6950
TTGCTGCATT CTGCCGTGTT CCGGAGATAG CTTCTTCAGA AGAGATGGTC 
7000
TCCAGAATTC CCCTTATTCT CGAAGTAATG TCCAAAGGgt atgttagatc 
7050
acctgattct tgcatttgcg actttccatg aagttttttt tttaatcaag 
7100
ctttgcttct gtgtcttcaa ctttttgcat attgtgattg cctaaagtta 
7150
ggaaattggc ttttggaatt tcagAATAAC TACAAACATG CTCGAAGATT 
7200
GCTATGAGCT TCTGTATTTG GTGTCCACGG CTTGTGAAGC TGGTCTCATG 
7250
ACTTTGATTA ACTCTGGAGG CTTGAGAGTG ATAGCTCCCC AGATGTCTGA 
7300
GTTACCTGAT Ggtaatacat actctttcat tgggtttaca ttcttttgtt 
7350
gtgtatatga tgcacattag attccattga atgctatttc ggattgatta 
7400
tatttggtgt caaagaaaac gtgccatgtt gaggtagatg gatttgataa 
7450
tagtttttca ctgggagcta atgtgagaca tgttattcag GTTCACATGC 
7500
CATGGAGGTT GCTATAAAGA TTCTGCAGTT ATTGGTTAGT AAGCTTGATT 
7550
GTGGGAGCAT GACTATTGAA CGCTTCTTAG AACTGTCTTT GGTGgtgagt 
7600
ctacttactt ggttactttt tgttttcttt tcgcaatact tactaaagct 
7650
gcaatgctga agttggactc caaacataat gttaactttt attcagATTG 
7700
CTGCTGTTGC ACGGCAGTTT GCGGTGTTGC ATAATGCCCT GAAGTTTGAA 
7750
GCACTCCATT TACTGTCTGC AGTCTTCTCG TCAGAGTATT C
7800