fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G40060 ATHB16 ,ATHB-16 homeobox protein 16 (.1)

>AT4G40060.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 630
HindIII A|AGCTT 600, 812
PstI CTGCA|G 559
XbaI T|CTAGA 567


Click here to view TAIR data

>AT4G40060.1 length:885
ATGAAGAGAC TAAGCAGCTC AGATTCAATG TGTGGTCTAA TCTCCACTTC 
50
TACAGATGAA CAGAGTCCAA GAGGGTACGG AAGTAATTAC CAATCTATGC 
100
TTGAAGGTTA CGATGAAGAT GCTACACTAA TCGAGGAATA TTCCGGCAAC 
150
CACCACCACA TGGGTCTATC GGAGAAGAAG AGAAGATTAA AAGTTGACCA 
200
AGTCAAAGCT CTTGAGAAGA ATTTCGAACT TGAGAATAAA CTCGAACCTG 
250
AGAGGAAAAC TAAATTAGCA CAAGAGCTTG GACTTCAACC TCGTCAAGTA 
300
GCTGTTTGGT TTCAGAACCG TCGTGCACGG TGGAAAACAA AACAGCTTGA 
350
AAAAGATTAC GGTGTTCTTA AGGGTCAATA CGATTCTCTC CGCCACAATT 
400
TCGATTCTCT CCGCCGTGAC AATGATTCCC TTCTCCAAGA GATTAGTAAA 
450
ATCAAAGCTA AGGTAAACGG TGAAGAAGAT AACAACAACA ACAAAGCTAT 
500
TACGGAGGGT GTTAAGGAAG AGGAAGTTCA CAAGACGGAT TCGATTCCTT 
550
CGTCTCCTCT GCAGTTTCTA GAACATTCCT CTGGTTTTAA CTACCGGCGA 
600
AGCTTCACTG ACCTCCGTGA CCTTCTACCG AATTCCACCG TTGTCGAGGC 
650
TGGATCTTCC GATAGTTGCG ATTCAAGCGC CGTTCTTAAC GACGAAACAA 
700
GTTCTGATAA CGGAAGATTG ACGCCGCCTG TGACGGTTAC TGGCGGGAGT 
750
TTCTTACAGT TTGTGAAAAC AGAGCAAACA GAGGATCACG AGGATTTTCT 
800
AAGCGGTGAA GAAGCTTGTG GTTTCTTCTC CGATGAACAG CCGCCGTCAC 
850
TTCATTGGTA CTCTGCTTCA GATCATTGGA CTTGA
900

>AT4G40060.1 longest ORF length:294
MKRLSSSDSM CGLISTSTDE QSPRGYGSNY QSMLEGYDED ATLIEEYSGN 
50
HHHMGLSEKK RRLKVDQVKA LEKNFELENK LEPERKTKLA QELGLQPRQV 
100
AVWFQNRRAR WKTKQLEKDY GVLKGQYDSL RHNFDSLRRD NDSLLQEISK 
150
IKAKVNGEED NNNNKAITEG VKEEEVHKTD SIPSSPLQFL EHSSGFNYRR 
200
SFTDLRDLLP NSTVVEAGSS DSCDSSAVLN DETSSDNGRL TPPVTVTGGS 
250
FLQFVKTEQT EDHEDFLSGE EACGFFSDEQ PPSLHWYSAS DHWT
300