fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G40060 ATHB16 ,ATHB-16 homeobox protein 16 (.1)

>AT4G40060.1 genomic map

>>Show CDS map




Uncut enzymes: ApaI, AscI, EcoRV, KpnI, NcoI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 196, 1622
BglII A|GATCT 52, 2060
EcoRI G|AATTC 1675, 2805, 5148
HindIII A|AGCTT 242, 3263, 4061, 5118, 5330, 6823
HpaI GTT|AAC 5915
NdeI CA|TATG 3284
PstI CTGCA|G 5077
SpeI A|CTAGT 1169, 6404, 7036
StyI C|C[AT][AT]GG 192, 1047, 1119, 1939
XbaI T|CTAGA 4051, 5085


Click here to view TAIR data

>AT4G40060 genomic sequence (4311-4365,4485-4870,4960-5403,) length:7225
CGGAACACCG TCGTCTTCAT CGCCGGGTTT ATTCGATTTC GCGGTGAGAT 
50
TAGATCTGCA AACAGGGCAA GTTGCGTGCG AGTAAAGCCA AGTATCGATA 
100
CAATCGATAT GGAACAAATG GTTACAAATC GGAAGCAATC GCACTGTTTC 
150
ATGATCTTCT AATTCGTTGA GACAAATCGC ACATTCTAAA TCCTTGGATC 
200
CGATTTTGGA TTCTTTAACA GAGGAGTAAG CGAAAACAGG GAAGCTTTCG 
250
ACGACGGCGT TGTCAAGACC GCCTCGCCGT GAACTGCCGT CGTTAGCTCG 
300
GTTGCGGAAG TATCTGGTGG AGGAATCAGG ATTAGAGCGA GCGCAATGGC 
350
GAATATAGAC GGAGAGTAAT CCGGTGAGGA AGAAGAGGGT TACGAGAACG 
400
GCGAAGACGG TGGTCTTCGA CGGAGTGTGA CCCGTTTGCA AGTCGGGTGG 
450
ACTCGGTGAG AAAGATTGGG CATTGGCTTT GCTCTGTATG ATGATTGCCA 
500
CGTGTAAGAT AATCCAACGG TGAGGATTAA AACACTCGAC GCGTGTCATC 
550
ATcggtcgtt cgaagcgacg ccggaaagat attaacggct gagatttatc 
600
cacgatgaat tagatttctg cttgcaaatg caaatgttta ttagggtgtt 
650
acttgttaga cgcaaaatat gtcagatacg aaggatatga tttatatact 
700
tagagaggag aagcatatag ctgtcccgaa taaacttcaa aaggttaata 
750
attatattgt tttgactttt agatgaactt aaagaaagtt tttttgatga 
800
agacaatagg gcaaaaatta tgtcaaattg gggggagata agttcgttac 
850
aatttcattt ttaatttagt catgtttctc cacttgttac tgaaatagtc 
900
taatccacta aactgtgtgc taggattaat tatatgtcaa tttttaattc 
950
atgttcgctg caaatacaca aactctttgt ctcttcgata gggtcaattt 
1000
aatcaatact tataggtcag aatgtttcat cgtacaatta ccttttcctt 
1050
ggtttcagac aagaaataac aaacaaacac agaaaaacaa cacaaagtgg 
1100
ataagtggtg tgtgatcgcc ttggcaacat aagaaaataa agattgatat 
1150
ttatggcaca acaacaatac tagtgatcga tcatagcaac tgaacattgc 
1200
agctaatggt tttggttgga tcaccgtcta aaatcggatt tggcaaaata 
1250
tgtatatacc agttgattga tgataacaaa attaatttac actcaattaa 
1300
ttggttgatg ttattacacc acattttttc tgtaaaatat attatttata 
1350
tgctaaaaaa agtcgtagat atttatacat cagatagatt acaaacttga 
1400
ttagctggtg acccgtgcgt ggcggctcat acaccgtcaa cgtcgatcac 
1450
ctcccttgtt ttcttgttta gattttcaat tttgtatttg tcttttctaC 
1500
TTATGGAATC GTAGAGTTTT AACGTTGTGG TTTGGTTTGC TTTCGTGTCT 
1550
CATATCTGAT AAGACATGGT ATTGAGTGTT TAGATCCGTT AATTCTGATG 
1600
GTCGATGGTG CTTAAAGTTG CGGATCCGCT CCTTGCCTCA AAGTGGAGTC 
1650
ACAAGTAGCT TCTGTTCTGT CTGAGAATTC TCTTCGTTGA GTCAACGCCT 
1700
CCATTGAAGG CTCTGGCTTT CCTTCTTGAT TCGTTTATCT TCTTCCCTTG 
1750
ATGAATCTAT GCAACATCAG ATAGGCTCGT GGTATCTCCC TCGTCGTCTT 
1800
CCTCCAATGT GTCTCTGTTG GCGAGTTGCG TTAGATTTGT TTAGGGATTT 
1850
TCGGAGTCTC TCTTTTGCGG ATCTTTGACT GTTCTGAGGT TGAGTCTTGT 
1900
TTGAATGAAG TTTCGGTTCT AGCCATCTGC TTTGTCTACC TTGGTGTTGT 
1950
GTTTGACATC GATGGTCCTG GAAAATCTCT CCTTGTGATG AGACGGACTC 
2000
GATGCTTTTT GCCATTGGCT CTTGGATAAA AATTTTTGGT TGGTTCTTCT 
2050
ATCTCTTTAA GATCTGCTTC GTTTGGAGTA TGTGGGTCAC TAATTTGCCA 
2100
TCTTAAGTTG TATTTCTTCC AGTTTAAGGT TATCGACTTC TCGGGGTTGG 
2150
TTTGGAACGT TTAATACTAT TCAATGCTCT ATCAAGTCTT TCAGTAGAGA 
2200
GAAGAGCTAT TCAATGGGTT TTGATTCGGA TCTTTCCACA AGACAAATAA 
2250
GACAATTATG CGTCGATCTC TTAGTTTCAA GTTCAGTCAT TTTCCTTTCA 
2300
GATTCTCATG ATTCTTAGTT CACTCATTGA AGGTTTTTCT GCTTATTTTC 
2350
TAAGTTTTAG CTTATGGTAT TTGTATTTTT GGTTATTTAT ACTTTTTTTT 
2400
TTTTGGTTCT TGTTTTTAGA GATATTATTT TGTTCTGCCG ACTTATTTTA 
2450
CCGAGAATTT TAGTTCCTTC TGCTGGTTTT TGTAACTTGT ACTCCACCAT 
2500
GTATCACCCT TAGCGGTTGC TATTTCATGA ATAATTCAGA CAGAAAAATA 
2550
TAATAATTCA AATTTGATAT GGATAAATGA GAatttccga atcttccaca 
2600
cttgaactta taataatcca tagagacata catggcagaa tttaaaatct 
2650
ctttcattct ttttcatcat ctttatatct tcaaagtgca tgtgctcggg 
2700
catcatcatc caaattccgt ttatactaat attattttcg aagctgatcg 
2750
agtagctata tacatattaa attgtaacat gtatgaaacg tgtacgggaa 
2800
cgttgaattc gacctatttt aaatttaaac ctgataccaa gaccaacaaa 
2850
accggtctta tacaataaat ggatcaggcc tcaggcctat aacaaaaaac 
2900
tacagtttag gggtccatta tctgaaactg ggtcataatg cagaggcctg 
2950
ccttgccatc tctttatacc taagttctac ttcttacaca tttcattttc 
3000
tctcatttag ataacgtttc tcgaaattga tcacaaatga aatgaatatg 
3050
acaaatcttt aaaattgaat aagtgatgac ccaaagcctt taattgtgtt 
3100
ctaaaaacat ttcattgtct ctcggaaaag ctccgtttca aagagagaac 
3150
cgtcatagga ttgtttcttt ggtttgcgtt atgtactttc acttagaaga 
3200
acgcaaatgc aaaattagaa gaaaaaaaac aatcaccaaa tatagtattg 
3250
aacttttcta taaagcttcg atttgagttg tgacatatgc tatagtatat 
3300
tgtatttatc actataccat tttaaacttt cctgtatgtt ttttacaggt 
3350
cgttcaaaac aagaattgat attttttgac ggtgccgttc gagcccatag 
3400
tttttggaca attcaatgaa ccaaacccaa attgcgtcag tcttgttccc 
3450
ccacccacaa gtctttcttt ccactcccct gcgttgccaa caataacata 
3500
taacactaat gtttttaata atatatccca catctaatat atgggattaa 
3550
atatgccatc cgtataattt tataacttat cctatcgaat tttaagtttg 
3600
ctcaggaaaa ttacatttgg tttcattaat caacaaacaa attatagttt 
3650
atcattttgt catcaaatct tctgtgacgt accttctgac gtttttcaga 
3700
ggatgttata ttttaaaaat ctacttttta aatgcatctt acgtatctct 
3750
ctactatccg ctgtttatta atttctctga atttttaagt ttaagaaaat 
3800
agaaacaccc ttaaaaaaaa taaggttaag cattaccaaa aataaaccca 
3850
tacggtgacg tatcacagac tccaccactt gttctaagcc gagccgagcc 
3900
aagccgtata actattggtt caaacttaac cttagttaca ttttaaccct 
3950
ttctctaagt ttggtttatt taaagaaaga taagtttggt ttatttaaag 
4000
aaagagaaag tgtgaaacca acttgttcat attgaaaaga accattgctc 
4050
tctagattaa aagcttctct ctctctctct ctctctctct ctctctctct 
4100
ctctctctct ctcttttgga ctttctcaat ccatatccct ctctctgttt 
4150
tttctaattt gagcctctaa agtctcctcg ttttgttcat gttgttgttc 
4200
aagtgaagaa gctcaattat gtttacaaca ttgttgtaat ttcaaaactt 
4250
cataagaatt tctctgataa taaagaaaaa gctggagtag aactatttta 
4300
aagtgtcatc ATGAAGAGAC TAAGCAGCTC AGATTCAATG TGTGGTCTAA 
4350
TCTCCACTTC TACAGgttct tattaccatc tttgttcttt ctactttttg 
4400
ctaatgtcag acaaaaccca tgtgatcctt tcttcacttt ccactgtttc 
4450
ttttattgac aagattcatt tggttacaca acagATGAAC AGAGTCCAAG 
4500
AGGGTACGGA AGTAATTACC AATCTATGCT TGAAGGTTAC GATGAAGATG 
4550
CTACACTAAT CGAGGAATAT TCCGGCAACC ACCACCACAT GGGTCTATCG 
4600
GAGAAGAAGA GAAGATTAAA AGTTGACCAA GTCAAAGCTC TTGAGAAGAA 
4650
TTTCGAACTT GAGAATAAAC TCGAACCTGA GAGGAAAACT AAATTAGCAC 
4700
AAGAGCTTGG ACTTCAACCT CGTCAAGTAG CTGTTTGGTT TCAGAACCGT 
4750
CGTGCACGGT GGAAAACAAA ACAGCTTGAA AAAGATTACG GTGTTCTTAA 
4800
GGGTCAATAC GATTCTCTCC GCCACAATTT CGATTCTCTC CGCCGTGACA 
4850
ATGATTCCCT TCTCCAAGAG gtacaatatt agagacttta aaccataaaa 
4900
attgaaactt cagagacgaa aatgcaaaaa ggtttgattt ttaaagtttt 
4950
tggttgcagA TTAGTAAAAT CAAAGCTAAG GTAAACGGTG AAGAAGATAA 
5000
CAACAACAAC AAAGCTATTA CGGAGGGTGT TAAGGAAGAG GAAGTTCACA 
5050
AGACGGATTC GATTCCTTCG TCTCCTCTGC AGTTTCTAGA ACATTCCTCT 
5100
GGTTTTAACT ACCGGCGAAG CTTCACTGAC CTCCGTGACC TTCTACCGAA 
5150
TTCCACCGTT GTCGAGGCTG GATCTTCCGA TAGTTGCGAT TCAAGCGCCG 
5200
TTCTTAACGA CGAAACAAGT TCTGATAACG GAAGATTGAC GCCGCCTGTG 
5250
ACGGTTACTG GCGGGAGTTT CTTACAGTTT GTGAAAACAG AGCAAACAGA 
5300
GGATCACGAG GATTTTCTAA GCGGTGAAGA AGCTTGTGGT TTCTTCTCCG 
5350
ATGAACAGCC GCCGTCACTT CATTGGTACT CTGCTTCAGA TCATTGGACT 
5400
TGAgaattgt ttatcaaatt ggtgctctgt ttagtctcaa tgggaaaaca 
5450
gagaagaggg caaaggtgga ataattgata aataaggatt aaggatgaag 
5500
gggattatta aattaaatcc gcgggagaag ttaattttgg gtttaagatt 
5550
gtaatggctc ttcatgtaat taacgatgtc gagaggggct ttcacagaaa 
5600
taggaatcaa tggggacact ctgatatgaa agcaataaaa ctacgtttga 
5650
ccccttaagt ctgaattgta ttacatttcc tacccctaaa cttttcaatt 
5700
gagtaatata acctatatct taatccaaca aaattttgaa aatttacctt 
5750
cttctaaaaa ttagaaagcc aaatttcttt tttactattt atcaaaaact 
5800
aaaaaaatat ctaaataacc caagttatcc aaccattccc aactttatta 
5850
taagtttttg tttgtaattt aaagtgtgta tgtttggttg tattagttac 
5900
acgtaaaaag tttagttaac acatcatcta ttaaaatcaa cgtgatataa 
5950
taacattcaa caaaacgata tgttaataat ctattaatat tgtgttgtaa 
6000
acgtatagtt tctattagta aaattatatt ttattttatt aataaacatg 
6050
aaatacaaac atgtgattca ttgatttgta attttgagat cgaccaaatt 
6100
caatttctat tttaggacac accttttgga aaaaaagaat catacattta 
6150
tcattatgca aattatattg ttctttatag ataaaatatg aggaaagaaa 
6200
gataaaatat gaagtttcta aaggaataga ggggttttaa aggagtagag 
6250
ggagtgaaat acaaaatgga ggaaagaaag acgcagcttt ttcccccgga 
6300
cctgtaacat ctaatcccac gacacgacat ctctttcttt ttttctttct 
6350
ttcttttttg gtaattttgt gaagaccaaa ttcattagtg aaaaagacat 
6400
tgaactagtg atcacgacaa aacccaaatc catctttatt atttacttga 
6450
ttgtattgga tcgaatatta atgttactat caacataaaa attacgaaag 
6500
gaaaaaaaac aaacaataaa tcacttttgt gagagtattg aaatagttaa 
6550
ttcaatctag cttttaagaa atggtggaaa tttattgata ttcgtgaaaa 
6600
ggttttttga ccttagctag aaatttagct tttggtgaaa gacaataaag 
6650
tagttcctaa taataaaggt gaaattggat taaagaaata ggattggctt 
6700
gtgagaaaat gctatcatca tcaatcatca aggtacttac ttctgttacc 
6750
atgattgtgc gtacgtgttt cagtggaagc atgggacatc gtttttagtg 
6800
aatgatgaaa acattctgtc agaagctttt accattgtca cggatcgtat 
6850
ctgaaattga ggcattcaaa tcacgtcatg acgccaacaa aattactatt 
6900
attatatact ttctctaatt ttattttata tgggtaaatg aatgttttgt 
6950
ttaaattagt cggaatacct tgatgaaacg gttatttagt aagctgatta 
7000
aatgcatcaa aattaataca agagatttga aatatactag tagtgataaa 
7050
ctgataatgc ctaccaaaaa caattcaatt ccgttggaaa aatacggttc 
7100
tatatacatg cactggaaat agaaaattat gataatattc ataagggagg 
7150
aaaaaaaggt aattaacttt tagttgtata aaatattaat gtcatttttt 
7200
tcatacagtc aaatggcaca gaaag
7250