fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G03680 PTL PETAL LOSS, Duplicated homeodomain-like superfamily protein (.1)

>AT5G03680.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SalI, SmaI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 394
HindIII A|AGCTT 1285
PvuII CAG|CTG 1503
SacI GAGCT|C 37
SpeI A|CTAGT 268


Click here to view TAIR data

>AT5G03680.1 length:1776
ATGGATCAAG ATCAGCATCC TCAGTACGGT ATACCGGAGC TCCGGCAGCT 
50
CATGAAAGGC GGAGGAAGGA CGACTACTAC AACACCGTCT ACTTCTTCTC 
100
ATTTTCCCTC TGATTTCTTC GGTTTTAACC TTGCTCCGGT GCAGCCACCG 
150
CCACACCGTC TTCATCAGTT CACTACTGAT CAAGATATGG GTTTCTTGCC 
200
ACGTGGCATA CATGGATTGG GTGGAGGTTC TTCAACGGCT GGAAATAACA 
250
GTAACTTAAA CGCGAGTACT AGTGGTGGAG GAGTTGGGTT TAGTGGGTTT 
300
CTTGACGGTG GTGGTTTCGG CAGCGGAGTA GGAGGAGACG GTGGAGGAAC 
350
TGGAAGGTGG CCGAGACAAG AAACCCTAAC TCTGTTGGAA ATTAGATCTC 
400
GTCTTGATCA TAAATTCAAA GAAGCTAATC AAAAAGGACC TCTTTGGGAT 
450
GAAGTTTCTA GGATTATGTC CGAGGAACAT GGATACCAAA GGAGTGGGAA 
500
GAAATGCAGA GAGAAGTTTG AGAATCTGTA CAAATACTAT AGGAAGACTA 
550
AAGAAGGCAA AGCCGGAAGA CAAGACGGAA AACATTACAG ATTTTTCCGG 
600
CAGCTCGAAG CGCTATACGG GGATTCTAAT AACTTGGTTT CTTGTCCCAA 
650
TCATAACACG CAGTTCATGA GCAGTGCTCT TCATGGTTTC CATACTCAAA 
700
ACCCTATGAA CGTTACTACA ACAACGTCCA ACATCCATAA CGTTGATAGT 
750
GTTCATGGTT TTCATCAAAG CCTTAGTCTT TCTAACAACT ACAACTCCTC 
800
CGAGCTTGAG CTGATGACTT CCTCTTCGGA AGGGAATGAT TCTAGTAGTA 
850
GAAGGAAAAA GAGGAGTTGG AAAGCGAAGA TAAAGGAGTT CATTGATACG 
900
AACATGAAAA GGTTGATAGA GAGGCAAGAT GTTTGGCTTG AGAAGTTGAC 
950
AAAGGTTATT GAAGACAAAG AGGAACAACG GATGATGAAA GAAGAGGAAT 
1000
GGAGGAAGAT TGAAGCTGCA AGGATTGATA AAGAGCATTT GTTTTGGGCT 
1050
AAAGAGAGGG CGAGGATGGA AGCTAGGGAT GTTGCGGTGA TTGAGGCATT 
1100
GCAATACTTG ACAGGAAAGC CATTGATAAA GCCGCTGTGT TCATCCCCGG 
1150
AAGAGAGGAC AAATGGTAAT AATGAGATCC GAAACAATAG TGAGACACAG 
1200
AATGAGAATG GAAGCGATCA AACGATGACT AACAATGTTT GTGTTAAAGG 
1250
AAGTAGTAGC TGCTGGGGTG AGCAAGAGAT TTTAAAGCTT ATGGAGATAA 
1300
GAACGAGCAT GGACTCGACC TTTCAAGAGA TATTAGGAGG GTGCTCGGAT 
1350
GAGTTTCTAT GGGAGGAAAT CGCAGCGAAG TTGATTCAGT TAGGGTTTGA 
1400
TCAGAGAAGT GCCTTATTAT GCAAGGAAAA GTGGGAATGG ATAAGCAATG 
1450
GAATGAGGAA AGAAAAGAAG CAAATCAACA AGAAAAGAAA GGATAATTCG 
1500
TCCAGCTGCG GCGTGTACTA CCCGAGAAAC GAAGAAAATC CAATCTACAA 
1550
TAATCGAGAA AGTGGATATA ATGATAATGA TCCGCATCAA ATCAACGAAC 
1600
AAGGCAATGT AGGTTCTTCA ACATCAAACG CAAACGCAAA CGCAAACGTA 
1650
ACCACTGGAA ATCCGAGCGG TGCAATGGCT GCTAGTACAA ACTGCTTCCC 
1700
GTTCTTCATG GGAGATGGAG ATCAGAATTT GTGGGAGAGT TATGGTTTGA 
1750
GGCTCAGTAA AGAAGAGAAT CAGTAA
1800

>AT5G03680.1 longest ORF length:591
MDQDQHPQYG IPELRQLMKG GGRTTTTTPS TSSHFPSDFF GFNLAPVQPP 
50
PHRLHQFTTD QDMGFLPRGI HGLGGGSSTA GNNSNLNAST SGGGVGFSGF 
100
LDGGGFGSGV GGDGGGTGRW PRQETLTLLE IRSRLDHKFK EANQKGPLWD 
150
EVSRIMSEEH GYQRSGKKCR EKFENLYKYY RKTKEGKAGR QDGKHYRFFR 
200
QLEALYGDSN NLVSCPNHNT QFMSSALHGF HTQNPMNVTT TTSNIHNVDS 
250
VHGFHQSLSL SNNYNSSELE LMTSSSEGND SSSRRKKRSW KAKIKEFIDT 
300
NMKRLIERQD VWLEKLTKVI EDKEEQRMMK EEEWRKIEAA RIDKEHLFWA 
350
KERARMEARD VAVIEALQYL TGKPLIKPLC SSPEERTNGN NEIRNNSETQ 
400
NENGSDQTMT NNVCVKGSSS CWGEQEILKL MEIRTSMDST FQEILGGCSD 
450
EFLWEEIAAK LIQLGFDQRS ALLCKEKWEW ISNGMRKEKK QINKKRKDNS 
500
SSCGVYYPRN EENPIYNNRE SGYNDNDPHQ INEQGNVGSS TSNANANANV 
550
TTGNPSGAMA ASTNCFPFFM GDGDQNLWES YGLRLSKEEN Q
600