◆◆◆IE_0036 detail◆◆◆

Code nameIE_0036
LocusAT2G47090
TemplateIT_0036 (total cDNA)
Donor VectorpDONR207
Forward primer8368 (GGGGACAAGTTTGTACAAAAAAGCAGGCTCCATGGATGATAGTTGCGCCGTTTGC)
Reverse primer8369 (GGGGACCACTTTGTACAAGAAAGCTGGGTCGACGAAGAGTTTTGCACTTCCTCTC)
Alignment with template seq.1st-2nd-
Alignment with TAIR7CDSアミノ酸配列corresponding:kigoshi一致-
comment
sequence
>IE_0036_2298bp
ATGGATGATAGTTGCGCCGTTTGCGCGGAGAATCTCGAATGGGTTGGTTACGGATCTTGTGGTCACAGAGAGGTTTGCTCTACTTGCGTTGTTCGTCTTC
GTTTCATACTCAATGATCGTCGATGCTGTATCTGCAAAACCGAATGCCCCGTCGTCTTTGTCACAAAGGCTTTGGGTGATTATACAAAGACGATTAGTGA
TTTCTCGACTACTTTCCCATCAGTACCAAAGGAAGGTCGAGTAGGATCCTTCTGGTATCATGAAGAAACCAATGTTTACTTTGATGACTTGAACCATTAC
ACAAGGATTAAAGCAATGTGCAGGCTCTCTTGCAATTTGTGTAACGATACAAACAAGACTCGACCAAAGAAAGAGCCTAACCATTGTGTTCGGTTTAAGA
GCGTTGAACACTTGAAAGATCATTTAAATCATCAGCACAAATTGCATATGTGCAGTTTATGTCTTGTAGGTCGTAAGGTTTTCATTTGTGAACAAAAGTT
GTTTACTAAGGGACAGCTGAACCAACATATAAGTAGTGGTGACTCGGAAGTTGATGGAAGTGAGAGTGAAAGAGGAGGTTTCACTGGTCATCCTATGTGT
GAGTTCTGTAAAAGACCATTCTATGGTGATAATGAGCTATACACTCATATGTCTAGAGAGCACTACACTTGTCATATATGCCAAAGGCTGAAGCCTGGAC
AATATGAATATTATGGAAACTATGATGATCTTGAGGTTCATTTCCGAAGTGACCATTTCCTATGTGAAGACGAAACCTGCCTTGCTAAGAAGTTCATAGT
TTTCCAAATCGAAGCTGAGCTAAAAAGGCATAATGCTATTGACCATGGAGGTAGAATGTCTCGGTCTCAACAAAATGCATCACTACAGATACAAGCCAGT
TTCCAATACCCGAACAGTCGCCGTGGAAGACGCCGATCTTCTCTTCGTGAGCCTAATCTTGTGCTTCTGGAATCTCAAGCATCTTATGCCTTTAACGACG
ATAATAATCTTCCTCAACATGTGGGACGCTCTGGAAATTCACGTCTTGGAGAATCTTCTTTTCCTCCACTCTCTGTGCAAGCAAACCAAGGCCAATCAAG
ATTTGGACAGAACTCAGAGAGTTTAGTTAGTAACACCACGACTACTCGTCAAAGACATCGTGCAAACCAAGGCCAATCAAGATTTGGACAGAATTCAGAG
AGTTTAGTTAGTAACACCACGACTACTCGTCAAAGACATCAAACAAATAGAAGTGCAACTTCTGGTTCTTCTCAAGCTTGGCCAGCACTAAACCGAGGCC
CGGCAGAAATATCAATTACAAGCAGGGTACAATCTTCTGGTGCTTCTGCTCAATCTCAATCTAGGCACCATGACAGAGTTGAAAGTACTAGAACTCTTGC
TTCTGCAGTTCCACAAGATGCTCGTACCACAGTTGGTGGATGCTCATCTGGTTCTTCTCTGAGTTCCGCCAATGCAACAAAGAGGAATAATCATCACTCG
TCTTCAACCCCTAAAATGTCTGAAACAAGATCACTGGCGCAGCCTTCTCATTCTGATTCTCCTCAAATTTCCGCTGTGAAAAATCGCAGGTCATCATCCA
CCAGTGCAAATGCAGGGAACATTCAAGTAGCGCAAGGTGTTTCTGATGTACAGTCTGACAATAAAAGTTTGGTTGAAAAAATACATGCCAGCCTTGGACA
CGATGAAGAGTTATTCATGGCCTTCAAGAATACATCAGGAAAGTATCGTCATGGTTCCATCGATGCCAGAACTTACTTGGAATATGTGAAAGGTTATGGT
TTGTCTCACTTAGTTCTGGATATGGCTAGACTCTGCCCGGACCCTCAGAGGCAGAAGGAACTCATTGATACCCACAACGCCTGCTTGAAAGGAGGAAATA
AAGGGAAAGCTGTGAAGGTTGAAAGTAGCAGTGACTCCAAGGGGGATAGATTTGTTGATACAGTGAGGAAGTTACAATTCTCTGACAAATCTCAGGACAA
AGACAAAGATAAGGATGCATACCGTTCAGATAAAGGCAAAACAAAAGTGACGACGTTGGTGAATTCTTCATCGGCTGGAGTGGGATTAGGTGACACAGGC
AAGCAACCTAAGAAAACTTCAAAGTTTCTCAGAACACGTCTAGGAGAGAAATCAATGGCTGCAGTACTAGATCTTAGGAATTCTAACCCAGAGCCTGAAC
CAGAACCTAAGAACGATAACTCCAAAAGGAGCCAGAACTCTCCCGGTGGATTGCCACTTCGTGGTGCTTGGAAGAGAGGAAGTGCAAAACTCTTCGTC

>IE_0036_translated
MDDSCAVCAENLEWVGYGSCGHREVCSTCVVRLRFILNDRRCCICKTECPVVFVTKALGDYTKTISDFSTTFPSVPKEGRVGSFWYHEETNVYFDDLNHY
TRIKAMCRLSCNLCNDTNKTRPKKEPNHCVRFKSVEHLKDHLNHQHKLHMCSLCLVGRKVFICEQKLFTKGQLNQHISSGDSEVDGSESERGGFTGHPMC
EFCKRPFYGDNELYTHMSREHYTCHICQRLKPGQYEYYGNYDDLEVHFRSDHFLCEDETCLAKKFIVFQIEAELKRHNAIDHGGRMSRSQQNASLQIQAS
FQYPNSRRGRRRSSLREPNLVLLESQASYAFNDDNNLPQHVGRSGNSRLGESSFPPLSVQANQGQSRFGQNSESLVSNTTTTRQRHRANQGQSRFGQNSE
SLVSNTTTTRQRHQTNRSATSGSSQAWPALNRGPAEISITSRVQSSGASAQSQSRHHDRVESTRTLASAVPQDARTTVGGCSSGSSLSSANATKRNNHHS
SSTPKMSETRSLAQPSHSDSPQISAVKNRRSSSTSANAGNIQVAQGVSDVQSDNKSLVEKIHASLGHDEELFMAFKNTSGKYRHGSIDARTYLEYVKGYG
LSHLVLDMARLCPDPQRQKELIDTHNACLKGGNKGKAVKVESSSDSKGDRFVDTVRKLQFSDKSQDKDKDKDAYRSDKGKTKVTTLVNSSSAGVGLGDTG
KQPKKTSKFLRTRLGEKSMAAVLDLRNSNPEPEPEPKNDNSKRSQNSPGGLPLRGAWKRGSAKLFV
Alignment CDS(TAIRver.9)_without_stop_codonとのalignment

100%一致しました。

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