◆◆◆IE_0039 detail◆◆◆

Code nameIE_0039
LocusAT4G06634
TemplateIT_0039 (total cDNA)
Donor VectorpDONR207
Forward primer8444 (GGGGACAAGTTTGTACAAAAAAGCAGGCTCCATGGATCATCAAAATTATCAATAC)
Reverse primer8445 (GGGGACCACTTTGTACAAGAAAGCTGGGTCATCTTCATACTCGGTCTCTTCATCG)
Alignment with template seq.1st-2nd-
Alignment with TAIR7CDSアミノ酸配列corresponding:kigoshi一致-
comment
sequence
>IE_0039_1161bp
ATGGATCATCAAAATTATCAATACCAAAATCCTTTCGAGAGACGACCCATCCTTAAATCCAAAGCTCCTGCTGTGAAGTGGATCAAAGAATGGGTACCAC
AAGATATTGTTGCTACAGGTGGAAAGTGTCATCTACACAAATGGGTCACAGAGGATACTTTTAGCAGACTTAAAGAAAAAGAGAAAGAGCCTGATGTTCC
TGAGCCTGAACCTGAACCAACTACAGAGATTTTGTTTCTCTGTAGTTATGATGGTTGCGGGAAGACTTTCTTTGATGTTAGTGCATTGAGGAAACATTCT
CATATCCATGGAGAAAGACAATATGTTTGTGATCAGGAAGGATGTGGAAAGAAATTTCTGGATAGTTCAAAGTTGAAGAGACATTATCTTATTCATACTG
GAGAGAGAAATTATATATGTACTTATGAAGGATGTGGAAAGGCATTCTCGTTGGATTTTAACCTTAGGTCTCACATGAAGACTCATTCACAAGAGAATTA
TCATATATGTCCTTACAGTGGGTGTGTGAAGAGATATGCTCATGAATACAAGCTAAAGAACCACGTTGCTGCCTACCATGAAAAGAATGGTGGTGGAGAG
ACTCCCAAATATACACCACCAGCAGAGAAAGTATTAAGGACTGTCAAAACACCTGCAACAGTTTGTGGCCCGTCTTCGGATCGGCCATACGCATGCCCTT
ACGAAGGGTGTGAGAAAGCTTACATACATGAGTACAAGCTTAAGCTCCACTTGAAGAGAGAACATCCAGGGCATTTACAAGAAGAGAACGCGGATACCCC
CACACTGAACAAGCACAATGGCAATGACAGGAATGAGATAGATGACGGGAGTGACCAAGATGTTTACAGGAAACACGCTAGTAATGGGAAAGGCCAGACA
CATAAACAACAGAGCAGAGCTAAGCCAAACATGAGGACACCACCAGCCAAAGTTGGAAAGAAAGGTTCTACCTCTTCGCCTGCCAAAGCAAGGATTGCAA
AAAAACCATGGCAAGCAAAAGAAACTTTTGAAGAAGTAGAAAGAGAAGAAGAAGAAGATAGCGAGGAGACAGAGGAAGATAGAGATAATGTGGAGGATGG
CTGGAGGTTTGGCGAAAACAACGAGGATGATGACGACGATGAAGAGACCGAGTATGAAGAT

>IE_0039_translated
MDHQNYQYQNPFERRPILKSKAPAVKWIKEWVPQDIVATGGKCHLHKWVTEDTFSRLKEKEKEPDVPEPEPEPTTEILFLCSYDGCGKTFFDVSALRKHS
HIHGERQYVCDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFSLDFNLRSHMKTHSQENYHICPYSGCVKRYAHEYKLKNHVAAYHEKNGGGE
TPKYTPPAEKVLRTVKTPATVCGPSSDRPYACPYEGCEKAYIHEYKLKLHLKREHPGHLQEENADTPTLNKHNGNDRNEIDDGSDQDVYRKHASNGKGQT
HKQQSRAKPNMRTPPAKVGKKGSTSSPAKARIAKKPWQAKETFEEVEREEEEDSEETEEDRDNVEDGWRFGENNEDDDDDEETEYED
Alignment CDS(TAIRver.9)_without_stop_codonとのalignment

100%一致しました。

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