◆◆◆IE_0040 detail◆◆◆

Code nameIE_0040
LocusAT3G47870
TemplateIT_0040 (total cDNA)
Donor VectorpDONR207
Forward primer8462 (GGGGACAAGTTTGTACAAAAAAGCAGGCTCCATGAGCAATACAAAACACATCCAC)
Reverse primer8463 (GGGGACCACTTTGTACAAGAAAGCTGGGTCCGCTTCTTTAGAATCCCCAAATGAT)
Alignment with template seq.1st-2nd-
Alignment with TAIR7CDSアミノ酸配列corresponding:kigoshi一致-
comment
sequence
>IE_0040_984bp
ATGAGCAATACAAAACACATCCACAAAGGGTTACAGGAGAGGCTTTTAGATCTTCTCTTGATCGCTCTTATAGTTTACATGACTCTTAAAGGCGGCACGA
GTGGGGCTTGTGCCGCGTGCAAGTACCAACGTAGACGCTGCGCCGCGGACTGCCCCCTCGCGCCTTACTTCCCAGCCGAACAACCGAAACTTTTCCAAAA
CGTTCACAGGCTATTCGGCGTAAGAAGTATCGTCAAGATCCTCGAAAAACTAGACGAAACTCAGAAACCAGAAGCAATGAAATCAATCATCTTCCAGTCT
TATGTCCGTGACCGTTCTCCTGTCCACGGTTGCCTCGGCGTCACGCAACAACTTCAATACATGATCTGGTTTGCTGAAGAAGAACTCAAAGCTGTCAATT
CTCAATTACAACTATATCGCTCTCAACCACAAAACGGTCAAAATCAAAACCAAAACCATAATCATAATCAGATGATTCATGAGCTTGGTAGTGATCATAA
TAAGCAGCAAGAAGATGTTACATCGCAGCAGCTTGACTTGGGTATGGGACTTAACGTTAACAATAATCAGAGCAATGTCGTTACACCATTCTTTAGTTCA
TTATTACCAGTTTCCGAAACACAACAGCCACAAATGTCTTACACTTATAGCTGCAGTGAGGTTAACAACAATGGCTATAGTCCTCCTGCTTATAATACAG
ATTCGGGCAAGGAGATTCTGACCAACAATAACAATGTTTGGGGTGATCAGAATCGATTTCTGTATAACAACAACAATGGAGGAGGATACAGCAACCAAAA
CGAGAGCTGTCATGAGATGAAGAGTAACGGTGTAATGGCAATACAATCACAGCTCGTAAATCTGCAAATGGTATCAAATCATCAGCGAGTGGAAGAAGAA
GAAGCTGATCATGAATACGATGAACTCCATCAGTTTCTTGATATCATTGACGATAGGCAATCATTTGGGGATTCTAAAGAAGCG

>IE_0040_translated
MSNTKHIHKGLQERLLDLLLIALIVYMTLKGGTSGACAACKYQRRRCAADCPLAPYFPAEQPKLFQNVHRLFGVRSIVKILEKLDETQKPEAMKSIIFQS
YVRDRSPVHGCLGVTQQLQYMIWFAEEELKAVNSQLQLYRSQPQNGQNQNQNHNHNQMIHELGSDHNKQQEDVTSQQLDLGMGLNVNNNQSNVVTPFFSS
LLPVSETQQPQMSYTYSCSEVNNNGYSPPAYNTDSGKEILTNNNNVWGDQNRFLYNNNNGGGYSNQNESCHEMKSNGVMAIQSQLVNLQMVSNHQRVEEE
EADHEYDELHQFLDIIDDRQSFGDSKEA
Alignment CDS(TAIRver.9)_without_stop_codonとのalignment

100%一致しました。

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