◆◆◆IE_0058 detail◆◆◆

Code nameIE_0058
LocusAT2G32250
TemplateIT_0058 (total cDNA)
Donor VectorpDONR207
Forward primer8464 (GGGGACAAGTTTGTACAAAAAAGCAGGCTCCATGGATGATGAAGATGTAGAAATA)
Reverse primer8465 (GGGGACCACTTTGTACAAGAAAGCTGGGTCATTGGATAAGCGGTGATCACTAGGA)
Alignment with template seq.1st-2nd-
Alignment with TAIR7CDSアミノ酸配列corresponding:kigoshi一致-
comment
sequence
>IE_0058_2421bp
ATGGATGATGAAGATGTAGAAATAGATCTTCTAACAAAAAGTAGTAATGTGGATGTATTTTGTGAAGCAAGTACAAGTGGGAACGTTGCTCAGTGTGCAA
CGGTTAGTGAGCTCAGAAATGGGATGGATTTTGAGTCAAAGGAAGCTGCATACTATTTCTACAGAGAATATGCTCGATCAGTGGGATTTGGTATCACAAT
AAAAGCTAGCCGTCGTTCTAAAAGATCAGGGAAGTTTATTGATGTCAAAATAGCGTGTTCGAGATTTGGAACCAAGCGCGAGAAAGCCACAGCTATCAAT
CCACGTTCATGTCCAAAGACCGGTTGCAAAGCCGGTTTGCATATGAAGAGGAAGGAAGATGAGAAATGGGTTATATATAATTTTGTAAAAGAACATAACC
ATGAGATATGTCCTGATGATTTTTATGTTAGCGTACGAGGAAAGAACAAGCCTGCTGGTGCGCTAGCAATAAAGAAAGGTCTTCAATTGGCTTTAGAAGA
GGAAGACTTAAAGCTATTGCTTGAGCATTTTATGGAGATGCAGGATAAGCAGCCTGGTTTTTTCTATGCGGTAGATTTCGATAGTGACAAACGTGTTAGA
AATGTGTTTTGGCTTGATGCGAAGGCTAAGCATGACTATTGCAGCTTTTCTGATGTTGTTCTGTTCGACACATTTTATGTTAGGAACGGATACAGAATCC
CATTTGCTCCTTTTATTGGGGTCAGCCATCACCGTCAATACGTTCTGCTTGGATGTGCTTTGATTGGAGAAGTGAGTGAGTCAACATATTCTTGGCTATT
TAGAACGTGGCTTAAAGCAGTCGGTGGTCAAGCTCCTGGAGTGATGATAACAGATCAGGATAAGCTTCTAAGTGATATTGTTGTTGAAGTCTTTCCAGAT
GTTCGTCATATTTTCTGTTTGTGGAGTGTGCTGAGCAAAATTTCTGAGATGCTGAATCCATTTGTGAGTCAAGATGATGGTTTTATGGAAAGTTTCGGAA
ATTGCGTAGCAAGCTCTTGGACAGATGAACATTTTGAAAGGAGGTGGTCAAATATGATTGGTAAATTTGAACTTAACGAGAATGAGTGGGTTCAGTTGTT
GTTTAGAGATCGTAAAAAATGGGTTCCACATTATTTTCATGGAATTTGTTTAGCTGGACTGTCTGGACCTGAAAGATCTGGCAGTATCGCCTCTCATTTC
GACAAGTATATGAACTCGGAGGCTACATTCAAGGACTTCTTTGAGCTCTACATGAAGTTTCTGCAATATCGATGTGATGTGGAAGCTAAGGATGATCTTG
AATATCAGAGCAAACAGCCTACACTGAGGTCTTCTTTGGCTTTCGAGAAACAGCTTTCCTTGATCTACACGGACGCTGCTTTTAAGAAGTTCCAAGCTGA
GGTACCCGGAGTTGTTTCTTGTCAACTTCAAAAAGAAAGAGAAGATGGGACAACAGCAATATTCCGCATTGAAGATTTCGAGGAACGACAAAATTTCTTC
GTTGCTTTGAACAACGAGTTGTTGGATGCGTGTTGCTCTTGTCATTTATTTGAGTACCAGGGATTCCTATGCAAACATGCGATACTTGTACTTCAAAGCG
CTGATGTTTCCCGCGTTCCGTCTCAGTATATATTGAAGCGCTGGTCAAAGAAAGGTAACAACAAAGAAGACAAAAACGATAAATGTGCCACTATAGATAA
CCGAATGGCACGTTTTGATGATCTATGTAGGCGCTTTGTCAAGCTGGGAGTAGTTGCATCTTTATCAGATGAAGCCTGCAAAACTGCTTTAAAGTTATTG
GAGGAAACCGTGAAGCATTGTGTTAGTATGGATAATTCTTCCAAGTTTCCTTCAGAGCCAGACAAGTTAATGACAGGTGGATCTATTGGCTTAGAAAACG
AAGGTGTGTTGGACTGTGCATCAAAAGTGTCCAAGAAAAAGAAAATTCAGAAGAAAAGAAAGGTATACTGTGGGCCAGAGGATGCAACAAACAGGTCAGA
AGAACTTCGCCAAGAAACCGAACAAGTTAGCTCCAGAGCTCCTACGTTTGAGAATTGTTACATTCCTCAAGCAAATATGGAAGAGCCCGAACTAGGCTCC
CGTGCAACAACTCTTGGGGTCTATTATTCAACACAACAAACTAATCAAGGATTCCCATCGATTTCTTCCATCCAGAATGGTTACTATGGACATCCGCCAA
CCATACAAGCTATGGGAAACTTGCATTCTATTCATGAACGAATGAGTCAATACGAGACACAACCAAGCATGCAAGGAGCTTTTCAGGGACAGACGGGGTT
TAGGGGAAGCGCTATCCGTGGCTGCTATGACATCGAAGAAACTCTGCACGACATGACAATGGGGTCCTCACAGTTTCAGGGATCTGATTCGAGCCATCCT
AGTGATCACCGCTTATCCAAT

>IE_0058_translated
MDDEDVEIDLLTKSSNVDVFCEASTSGNVAQCATVSELRNGMDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFIDVKIACSRFGTKREKATAIN
PRSCPKTGCKAGLHMKRKEDEKWVIYNFVKEHNHEICPDDFYVSVRGKNKPAGALAIKKGLQLALEEEDLKLLLEHFMEMQDKQPGFFYAVDFDSDKRVR
NVFWLDAKAKHDYCSFSDVVLFDTFYVRNGYRIPFAPFIGVSHHRQYVLLGCALIGEVSESTYSWLFRTWLKAVGGQAPGVMITDQDKLLSDIVVEVFPD
VRHIFCLWSVLSKISEMLNPFVSQDDGFMESFGNCVASSWTDEHFERRWSNMIGKFELNENEWVQLLFRDRKKWVPHYFHGICLAGLSGPERSGSIASHF
DKYMNSEATFKDFFELYMKFLQYRCDVEAKDDLEYQSKQPTLRSSLAFEKQLSLIYTDAAFKKFQAEVPGVVSCQLQKEREDGTTAIFRIEDFEERQNFF
VALNNELLDACCSCHLFEYQGFLCKHAILVLQSADVSRVPSQYILKRWSKKGNNKEDKNDKCATIDNRMARFDDLCRRFVKLGVVASLSDEACKTALKLL
EETVKHCVSMDNSSKFPSEPDKLMTGGSIGLENEGVLDCASKVSKKKKIQKKRKVYCGPEDATNRSEELRQETEQVSSRAPTFENCYIPQANMEEPELGS
RATTLGVYYSTQQTNQGFPSISSIQNGYYGHPPTIQAMGNLHSIHERMSQYETQPSMQGAFQGQTGFRGSAIRGCYDIEETLHDMTMGSSQFQGSDSSHP
SDHRLSN
Alignment CDS(TAIRver.9)_without_stop_codonとのalignment

100%一致しました。

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