◆◆◆IE_0079 detail◆◆◆

Code nameIE_0079
LocusAT3G61150
TemplateIT_0079 (total cDNA)
Donor VectorpDONR207
Forward primer8743 (GGGGACAAGTTTGTACAAAAAAGCAGGCTCCATGAATTTCAACGGTTTTCTCGAC)
Reverse primer8744 (GGGGACCACTTTGTACAAGAAAGCTGGGTCGGTGCTATCACAATGAAGAGCAGCT)
Alignment with template seq.1st-2nd-
Alignment with TAIR7CDSアミノ酸配列corresponding:kigoshi一致-
comment
sequence
>IE_0079_2424bp
ATGAATTTCAACGGTTTTCTCGACGACGGTGCTGGAGCCTCAAAGCTACTCTCTGATGCTCCGTACAACAACCACTTCTCTTTCTCCGCCGTAGACACCA
TGCTCGGAAGCGCCGCCATTGCTCCTTCTCAGTCTCTTCCTTTCTCTTCTTCAGGCCTCTCTCTCGGACTCCAAACAAATGGAGAAATGAGTAGAAACGG
AGAGATTATGGAGTCAAACGTAAGTCGTAAGAGTAGTAGAGGAGAAGATGTAGAAAGCAGATCTGAAAGTGATAACGCTGAAGCTGTCTCCGGTGACGAT
TTAGATACCTCCGATAGACCTTTAAAGAAGAAGAAACGTTACCATCGTCACACTCCTAAACAAATTCAAGACCTCGAATCGGTTTTTAAAGAGTGTGCAC
ATCCAGACGAGAAGCAACGTCTTGATCTTAGCCGTCGACTTAACTTAGATCCTCGTCAAGTCAAGTTCTGGTTCCAGAATCGTCGTACTCAGATGAAGAC
TCAAATCGAACGACATGAGAATGCTTTGTTGAGGCAAGAGAACGATAAGCTTCGAGCTGAGAATATGTCTGTACGCGAAGCTATGAGAAACCCTATGTGT
GGTAATTGCGGCGGACCTGCCGTTATCGGTGAGATCTCAATGGAAGAGCAACATCTGAGAATTGAAAACTCTCGTCTCAAAGATGAGTTAGACCGAGTCT
GTGCCTTAACCGGTAAGTTTCTTGGCCGGTCTAATGGTTCACATCATATACCGGACTCAGCACTTGTTCTCGGCGTTGGTGTTGGTTCTGGTGGATGTAA
TGTTGGTGGTGGTTTCACTCTCTCTTCTCCGCTGTTGCCTCAAGCTTCTCCTAGATTTGAGATTTCTAATGGAACCGGTTCTGGTTTGGTGGCTACGGTT
AACCGTCAACAACCGGTTAGTGTTAGTGATTTTGATCAGAGATCGAGGTATTTGGATTTAGCTCTTGCGGCTATGGATGAGCTTGTGAAGATGGCTCAGA
CACGTGAGCCGCTCTGGGTTCGAAGCTCGGATTCTGGTTTTGAAGTGCTGAACCAGGAAGAGTACGACACAAGTTTCTCTCGGTGTGTTGGACCAAAACA
AGATGGGTTTGTCTCAGAAGCTTCTAAAGAAGCTGGAACTGTTATCATCAATAGCTTAGCGCTCGTTGAAACCTTAATGGACTCGGAACGGTGGGCGGAA
ATGTTTCCTAGTATGGTCTCAAGAACTTCAACCACAGAGATTATCTCTAGTGGCATGGGAGGGCGAAATGGTGCACTTCACCTGATGCACGCAGAGCTTC
AACTGCTGTCTCCACTCGTGCCGGTTAGACAAGTGTCGTTCTTGCGGTTCTGTAAACAGCACGCGGAAGGTGTTTGGGCAGTCGTGGATGTCTCAATTGA
TTCCATTAGAGAAGGTTCTTCTTCGAGCTGTAGAAGATTACCATCCGGTTGCCTCGTACAAGACATGGCCAATGGCTACTCAAAGGTAACATGGATCGAG
CACACGGAGTATGACGAAAACCACATCCACCGTTTATACCGCCCATTACTCAGGTGCGGTCTAGCGTTTGGTGCGCATCGATGGATGGCTGCATTACAAC
GTCAATGCGAATGCCTCACGATTCTCATGTCCTCCACTGTTTCCACTTCCACTAATCCATCCCCTATAAACTGCAATGGGAGAAAAAGCATGCTAAAGCT
AGCGAAGAGGATGACTGATAATTTCTGTGGAGGGGTTTGTGCTTCGTCGTTACAGAAATGGAGCAAACTCAACGTTGGCAACGTCGACGAAGACGTTAGG
ATAATGACTAGGAAGAGTGTAAACAATCCTGGCGAGCCGCCTGGGATAATTCTAAATGCGGCGACGTCAGTTTGGATGCCGGTATCTCCGAGGCGGTTGT
TTGACTTCCTTGGAAACGAACGGCTTAGATCGGAATGGGATATCTTATCCAACGGTGGACCAATGAAAGAGATGGCCCATATAGCTAAAGGCCATGACCG
TTCCAACTCCGTCTCCCTCCTCCGTGCCAGCGCGATAAATGCGAATCAGAGTAGTATGCTGATATTACAAGAGACAAGCATAGACGCTGCAGGAGCGGTT
GTCGTGTACGCGCCTGTTGATATCCCAGCAATGCAAGCTGTGATGAACGGTGGAGATTCTGCTTACGTGGCACTCCTTCCTTCAGGATTCGCCATTCTCC
CTAACGGTCAGGCTGGTACGCAACGCTGCGCCGCAGAGGAACGTAACAGTATTGGTAACGGTGGGTGCATGGAGGAAGGAGGGTCGTTACTAACGGTGGC
GTTTCAGATACTGGTGAATAGTTTGCCTACGGCTAAGCTAACGGTGGAATCTGTGGAGACGGTTAATAATTTGATATCGTGCACCGTTCAGAAGATTAAA
GCTGCTCTTCATTGTGATAGCACC

>IE_0079_translated
MNFNGFLDDGAGASKLLSDAPYNNHFSFSAVDTMLGSAAIAPSQSLPFSSSGLSLGLQTNGEMSRNGEIMESNVSRKSSRGEDVESRSESDNAEAVSGDD
LDTSDRPLKKKKRYHRHTPKQIQDLESVFKECAHPDEKQRLDLSRRLNLDPRQVKFWFQNRRTQMKTQIERHENALLRQENDKLRAENMSVREAMRNPMC
GNCGGPAVIGEISMEEQHLRIENSRLKDELDRVCALTGKFLGRSNGSHHIPDSALVLGVGVGSGGCNVGGGFTLSSPLLPQASPRFEISNGTGSGLVATV
NRQQPVSVSDFDQRSRYLDLALAAMDELVKMAQTREPLWVRSSDSGFEVLNQEEYDTSFSRCVGPKQDGFVSEASKEAGTVIINSLALVETLMDSERWAE
MFPSMVSRTSTTEIISSGMGGRNGALHLMHAELQLLSPLVPVRQVSFLRFCKQHAEGVWAVVDVSIDSIREGSSSSCRRLPSGCLVQDMANGYSKVTWIE
HTEYDENHIHRLYRPLLRCGLAFGAHRWMAALQRQCECLTILMSSTVSTSTNPSPINCNGRKSMLKLAKRMTDNFCGGVCASSLQKWSKLNVGNVDEDVR
IMTRKSVNNPGEPPGIILNAATSVWMPVSPRRLFDFLGNERLRSEWDILSNGGPMKEMAHIAKGHDRSNSVSLLRASAINANQSSMLILQETSIDAAGAV
VVYAPVDIPAMQAVMNGGDSAYVALLPSGFAILPNGQAGTQRCAAEERNSIGNGGCMEEGGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIK
AALHCDST
Alignment CDS(TAIRver.9)_without_stop_codonとのalignment

100%一致しました。

このページのTOPに戻る