◆◆◆IE_03C07 detail◆◆◆

Code name	IE_03C07
Locus	AT2G01500
Template	IT_03C07 (HR2269)
Donor Vector	pDONR207
Forward primer	IPF_03C07 (ggggacaagtttgtacaaaaaagcaggcttcATGGGCTACATCTCCAACAACAACCTCA)
Reverse primer	IPR_03C07 (ggggaccactttgtacaagaaagctgggttGTTCTTCAGAGGCATGAACTCGTAGTAGTA)
Alignment with template seq.	1st	アミノ酸配列100%一致	2nd	-
Alignment with TAIR7CDS	1st	アミノ酸配列99.60%一致	2nd	-
comment	1st:Templateの配列とは一致
sequence	>IE_03C07_813bp ATGGGCTACATCTCCAACAACAACCTCATCAACTATTTGCCCCTCTCTACTACTCAACCTCCTCTTCTTCTCACCCACTGTGATATTAACGGCAATGATC ACCATCAGCTCATAACCGCATCATCAGGAGAACACGATATTGATGAACGGAGAAACAACATTCCTGCGGCGGCGACTTTGAGATGGAATCCGACGCCAGA GCAGATCACGACGCTAGAAGAGCTTTACAGAAGCGGAACACGGACGCCGACGACGGAACAGATCCAACAGATAGCATCTAAGCTTCGTAAATATGGGAGA ATCGAAGGGAAGAACGTTTTCTATTGGTTTCAGAATCATAAGGCTAGAGAGAGACTAAAACGCCGCCGTCGTGAAGGTGGTGCTATTATCAAACCACATA AAGACGTCAAGGATTCATCATCAGGTGGTCATCGAGTTGATCAGACAAAGCTCTGCCCATCTTTTCCACACACAAACCGACCACAGCCACAGCATGAATT AGATCCTGCGAGTTACAATAAAGACAACAATGCTAATAATGAAGATCATGGGACGACTGAAGAATCTGATCAGAGGGCATCAGAGGTTGGTAAATACGCC ACATGGAGAAATCTTGTTACTTGGTCGATAACTCAACAACCGGAAGAGATTAATATCGACGAAAATGTCAACGGAGAAGAAGAAGAAACGAGGGACAACC GGACTTTAAATCTCTTTCCGGTTAGGGAGTACCAAGAGAAAACAGGCCGGTTGATAGAGAAGACGAAAGCATGCAACTACTGTTACTACTACGAGTTCAT GCCTCTGAAGAAC >IE_03C07_translated MGYISNNNLINYLPLSTTQPPLLLTHCDINGNDHHQLITASSGEHDIDERRNNIPAAATLRWNPTPEQITTLEELYRSGTRTPTTEQIQQIASKLRKYGR IEGKNVFYWFQNHKARERLKRRRREGGAIIKPHKDVKDSSSGGHRVDQTKLCPSFPHTNRPQPQHELDPASYNKDNNANNEDHGTTEESDQRASEVGKYA TWRNLVTWSITQQPEEINIDENVNGEEEETRDNRTLNLFPVREYQEKTGRLIEKTKACNYCYYYEFMPLKN
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 812/813 (99.9%)（アミノ酸配列で270/271 (99.6%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT2G01 ATGGGCTACATCTCCAACAACAACCTCATCAACTATTTGCCCCTCTCTACTACTCAACCTCCTCTTCTTCTCACCCACTGTGATATTAACGGCAATGATC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: IE_03C ATGGGCTACATCTCCAACAACAACCTCATCAACTATTTGCCCCTCTCTACTACTCAACCTCCTCTTCTTCTCACCCACTGTGATATTAACGGCAATGATC 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G01 ACCATCAGCTCATAACCGCATCATCAGGAGAACACGATATTGATGAACGGAAAAACAACATTCCTGCGGCGGCGACTTTGAGATGGAATCCGACGCCAGA ::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: IE_03C ACCATCAGCTCATAACCGCATCATCAGGAGAACACGATATTGATGAACGGAGAAACAACATTCCTGCGGCGGCGACTTTGAGATGGAATCCGACGCCAGA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G01 GCAGATCACGACGCTAGAAGAGCTTTACAGAAGCGGAACACGGACGCCGACGACGGAACAGATCCAACAGATAGCATCTAAGCTTCGTAAATATGGGAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: IE_03C GCAGATCACGACGCTAGAAGAGCTTTACAGAAGCGGAACACGGACGCCGACGACGGAACAGATCCAACAGATAGCATCTAAGCTTCGTAAATATGGGAGA 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT2G01 ATCGAAGGGAAGAACGTTTTCTATTGGTTTCAGAATCATAAGGCTAGAGAGAGACTAAAACGCCGCCGTCGTGAAGGTGGTGCTATTATCAAACCACATA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: IE_03C ATCGAAGGGAAGAACGTTTTCTATTGGTTTCAGAATCATAAGGCTAGAGAGAGACTAAAACGCCGCCGTCGTGAAGGTGGTGCTATTATCAAACCACATA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT2G01 AAGACGTCAAGGATTCATCATCAGGTGGTCATCGAGTTGATCAGACAAAGCTCTGCCCATCTTTTCCACACACAAACCGACCACAGCCACAGCATGAATT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: IE_03C AAGACGTCAAGGATTCATCATCAGGTGGTCATCGAGTTGATCAGACAAAGCTCTGCCCATCTTTTCCACACACAAACCGACCACAGCCACAGCATGAATT 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT2G01 AGATCCTGCGAGTTACAATAAAGACAACAATGCTAATAATGAAGATCATGGGACGACTGAAGAATCTGATCAGAGGGCATCAGAGGTTGGTAAATACGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: IE_03C AGATCCTGCGAGTTACAATAAAGACAACAATGCTAATAATGAAGATCATGGGACGACTGAAGAATCTGATCAGAGGGCATCAGAGGTTGGTAAATACGCC 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT2G01 ACATGGAGAAATCTTGTTACTTGGTCGATAACTCAACAACCGGAAGAGATTAATATCGACGAAAATGTCAACGGAGAAGAAGAAGAAACGAGGGACAACC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: IE_03C ACATGGAGAAATCTTGTTACTTGGTCGATAACTCAACAACCGGAAGAGATTAATATCGACGAAAATGTCAACGGAGAAGAAGAAGAAACGAGGGACAACC 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT2G01 GGACTTTAAATCTCTTTCCGGTTAGGGAGTACCAAGAGAAAACAGGCCGGTTGATAGAGAAGACGAAAGCATGCAACTACTGTTACTACTACGAGTTCAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: IE_03C GGACTTTAAATCTCTTTCCGGTTAGGGAGTACCAAGAGAAAACAGGCCGGTTGATAGAGAAGACGAAAGCATGCAACTACTGTTACTACTACGAGTTCAT 710 720 730 740 750 760 770 780 790 800 810 AT2G01 GCCTCTGAAGAAC ::::::::::::: IE_03C GCCTCTGAAGAAC 810 10 20 30 40 50 60 70 80 90 100 AT2G01 MGYISNNNLINYLPLSTTQPPLLLTHCDINGNDHHQLITASSGEHDIDERKNNIPAAATLRWNPTPEQITTLEELYRSGTRTPTTEQIQQIASKLRKYGR ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: IE_03C MGYISNNNLINYLPLSTTQPPLLLTHCDINGNDHHQLITASSGEHDIDERRNNIPAAATLRWNPTPEQITTLEELYRSGTRTPTTEQIQQIASKLRKYGR 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G01 IEGKNVFYWFQNHKARERLKRRRREGGAIIKPHKDVKDSSSGGHRVDQTKLCPSFPHTNRPQPQHELDPASYNKDNNANNEDHGTTEESDQRASEVGKYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: IE_03C IEGKNVFYWFQNHKARERLKRRRREGGAIIKPHKDVKDSSSGGHRVDQTKLCPSFPHTNRPQPQHELDPASYNKDNNANNEDHGTTEESDQRASEVGKYA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 AT2G01 TWRNLVTWSITQQPEEINIDENVNGEEEETRDNRTLNLFPVREYQEKTGRLIEKTKACNYCYYYEFMPLKN ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: IE_03C TWRNLVTWSITQQPEEINIDENVNGEEEETRDNRTLNLFPVREYQEKTGRLIEKTKACNYCYYYEFMPLKN 210 220 230 240 250 260 270

このページのTOPに戻る